| Protein: | dve-PB |
| Organism: | Drosophila melanogaster |
| Length: | 780 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dve-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
627.0 | [0..6] | [780..250] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MLEEAKSLPL HCVVESVHSL HASLTIDTRQ PWKRRPNIET DSYVIIAAAT PWSEIVQTAL 60
61 QRLGYSQEVA NTARGSLIIK HWKPIPLEQI SDNPAVPVSD IVGELTSVIT LRIVILRPKT 120
121 SPFGEIKDKL LKLLVLQSHA VLRSTGCPLD EVTLSQICRS SHQNTYALPG GEISDELRRK 180
181 FDQWWSNQLS PQATAMTPKM LPFMTGPSAV P
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [212-294] |
1 11 21 31 41 51
| | | | | |
1 VPVAVPGEMD FPVGTAMAAA AAAAAHAAAA GGAAGGNPLG SMGSRESLLL ANEAAHHAGA 60
61 GQAPGPGHHG SMLVHPMHAS MHH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [295-392] |
1 11 21 31 41 51
| | | | | |
1 HHHHGGGGGH GPPYPNQKTR MRTSFDPEME LPKLQKWFAD NPHPSRQQIQ TYVVQLNALE 60
61 SRRGRKPLDV NNVVYWFKNA RAAQKRAEMR GGSLGSAI
|
| Detection Method: | |
| Confidence: | 2.63 |
| Match: | 2da6A |
| Description: | No description for 2da6A was found. |
|
Region A: Residues: [393-482] |
1 11 21 31 41 51
| | | | | |
1 SALGHAAMNG YLSQHAPLGQ NSSSSAGSQP MSMGNLSMSH DYLKSPLSLK SEDIDTMSQH 60
61 SDDMDEEQSR PNTPQLPLSL TTHERHRSSP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [483-652] |
1 11 21 31 41 51
| | | | | |
1 LMDEDEDEAG EQQQPQEAKS DGMNGSVKDE ERQEKSRDEL QDNEKENSNG EDRHLDADAQ 60
61 MEASSNLNNN HNNSSLHIEQ EVGSTPKRST PKEEDDDLDM DEDEEDNEND ASHLDEFRSP 120
121 SPDLAGGVVP HKDQLPFPMV PNSMFSQSFM YMSHYIPAFG QAAAGHPHHH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [653-780] |
1 11 21 31 41 51
| | | | | |
1 AAAAAAAAGI QPNALMGGGG LNLSSISNEE RRKRNRTFID PVTEVPKLEQ WFAMNTHPSH 60
61 NLILKYTEDL NTMPYRQKFP RLESKNVQFW FKNRRAKCKR LKMSLYDSNQ CAQLGGLGSF 120
121 VPKYEERD
|
| Detection Method: | |
| Confidence: | 15.09691 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.41271657675151 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.26183812259792 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| transcription activator activity | 1.77700860354597 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.14886080629275 | bayes_pls_golite062009 |
| chromatin binding | 1.04132983826241 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| protein binding | 0.830419844171551 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.25931464844298 | bayes_pls_golite062009 |
