| Protein: | gi|74876832, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 924 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|74876832, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
529.0 | [0..1] | [924..1] |
|
Region A: Residues: [1-464] |
1 11 21 31 41 51
| | | | | |
1 MSIQKLNDTT NSGYVSSEET DSLLVSSSNP SKGGGRTALL RQVKSNSTNG PTTGASTSSS 60
61 GSVSGGGGGS GSGGGSASGS AAGASKPTLM RQDRTSTYLT SPQQSQHARM GSEESMRGGA 120
121 SGAAGHDEDV EQGLVRSSIV PDIEVHEEDQ EQHSQQLNAT TMATMTNNQQ QQQPTISIMN 180
181 LSLKPGDSHS HSSSPGSHPN LGTSSYQNLA SSIPPSVPSR CRACRNCSRR ASTTPTTLID 240
241 RSASRDSVKS AFQQGNLSGS MAICISNSAL PQQQQLQQQY HLQQQQQQHY QLQQHHLHQQ 300
301 QLQQSQQQVP PVLITSSPTN GSRIIRQSSQ PESSSTAICC GPHSACVGHA HSHSHTVPNV 360
361 SLKQLRESSG DGIAGIAADS LRINGGMRPF KQLRKPASTL SIPGSMKTPS IANREQISSG 420
421 CNEEAAEALV GIHSDYPRYM EERALTGGNT SRKPSTNSAK HKPN
|
| Detection Method: |  |
| Confidence: | 7.0 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [465-765] |
1 11 21 31 41 51
| | | | | |
1 VGYRLGKRKA LFEKRKRISD YALVMGMFGI IVMVIENELS SAGVYTKASF YSTALKTLIS 60
61 VSTVILLGLI VAYHALEVQL FMIDNCADDW RIAMTWQRIS QIGLELFICA IHPIPGEYYF 120
121 QWTTKLANKN KTIGTEMVPY DVALSLPMFL RLYLICRVML LHSKLFTDAS SRSIGALNRI 180
181 NFNTRFVLKT LMTICPGTVL LVFMVSLWII ASWTLRQCER FHDEEHANLL NSMWLTAITF 240
241 LCVGYGDIVP NTYCGRGITL TCGMVGAGCT ALLVAVVSRK LELTRAEKHV HNFMMDTQLT 300
301 K
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1orqC |
| Description: | Potassium channel KVAP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| voltage-gated potassium channel activity | 12.0716262326447 | bayes_pls_golite062009 |
| potassium channel activity | 12.0564503263181 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 11.2479281243224 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 11.0164314117387 | bayes_pls_golite062009 |
| voltage-gated channel activity | 10.9923023836994 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 9.85051068330727 | bayes_pls_golite062009 |
| cation channel activity | 9.62064031772276 | bayes_pls_golite062009 |
| ion channel activity | 8.91395130684665 | bayes_pls_golite062009 |
| gated channel activity | 8.84587381436962 | bayes_pls_golite062009 |
| channel activity | 8.68489845295557 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 8.68489845295557 | bayes_pls_golite062009 |
| substrate-specific channel activity | 8.67927944890782 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 5.74511802205447 | bayes_pls_golite062009 |
| ligand-gated channel activity | 5.74511802205447 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.13805155650973 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 5.0997110076666 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.04374327766634 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.64120459994573 | bayes_pls_golite062009 |
| transporter activity | 2.93091397928047 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.82224868778929 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.79688978937497 | bayes_pls_golite062009 |
|
Region A: Residues: [766-820] |
1 11 21 31 41 51
| | | | | |
1 RLKNAAANVL RETWLIYKHT RLVKRVNPGR VRTHQRKFLL AIYALRKVKM DQRKL
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 1kkdA |
| Description: | Small-conductance potassium channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| potassium channel activity | 12.9154216859515 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 10.690117627191 | bayes_pls_golite062009 |
| cation channel activity | 10.4729582700993 | bayes_pls_golite062009 |
| ion channel activity | 9.76420146980976 | bayes_pls_golite062009 |
| gated channel activity | 9.69845089208228 | bayes_pls_golite062009 |
| channel activity | 9.53251272468341 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 9.53251272468341 | bayes_pls_golite062009 |
| substrate-specific channel activity | 9.52766364291262 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.94944590079392 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.84582254185274 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.42471865207378 | bayes_pls_golite062009 |
| calcium-activated potassium channel activity | 4.85096783740785 | bayes_pls_golite062009 |
| ion gated channel activity | 3.66857233866209 | bayes_pls_golite062009 |
| transporter activity | 3.65156094985283 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.56349914685586 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5594499564237 | bayes_pls_golite062009 |
| small conductance calcium-activated potassium channel activity | 3.44162773824006 | bayes_pls_golite062009 |
| calcium activated cation channel activity | 3.35031790098165 | bayes_pls_golite062009 |
| protein binding | 1.61033690476624 | bayes_pls_golite062009 |
| binding | 1.32969330984971 | bayes_pls_golite062009 |
|
Region A: Residues: [821-924] |
1 11 21 31 41 51
| | | | | |
1 MDNANTITDM AKTQNTVYEI ISDMSSRQDA IEERLTNLED KMQSIQEHME SLPDLLSRCL 60
61 TQHQERIEQR RNFLHPDTAA VAPIQAPTPQ SMFNAAPMLF PHSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
