| Protein: | HMX2 |
| Organism: | Homo sapiens |
| Length: | 273 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HMX2.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-34 | [1..273] | [1..273] |
|
|
1.0E-32 | [1..273] | [1..273] |
|
|
6.0E-32 | [1..273] | [1..273] |
|
|
4.0E-31 | [1..273] | [1..273] |
|
|
4.0E-30 | [1..273] | [1..273] |
|
|
2.0E-29 | [6..216] | [2..214] |
|
|
2.0E-29 | [16..209] | [1..190] |
|
|
3.0E-29 | [16..217] | [1..203] |
|
|
3.0E-29 | [16..219] | [1..199] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MGSKEDAGKG CPAAGGVSSF TIQSILGGGP SEAPREPVGW PARKRSLSVS SEEEEPDDGW 60
61 KAPACFCPDQ HGPKEQGPKH HPPIPFPCLG TPKGSGGSGP GGLERTPFLS PSHSDFKEEK 120
121 ERLLPAGSPS PGSER
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-273] |
1 11 21 31 41 51
| | | | | |
1 PRDGGAERQA GAAKKKTRTV FSRSQVYQLE STFDMKRYLS SSERACLASS LQLTETQVKT 60
61 WFQNRRNKWK RQLSAELEAA NMAHASAQTL VSMPLVFRDS SLLRVPVPRS LAFPAPLYYP 120
121 GSNLSALPLY NLYNKLDY
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1homA |
| Description: | DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.20302368446064 | bayes_pls_golite062009 |
| DNA binding | 3.910335137985 | bayes_pls_golite062009 |
| nucleic acid binding | 3.70444192553266 | bayes_pls_golite062009 |
| transcription factor activity | 3.41495638905535 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.0896307866191 | bayes_pls_golite062009 |
| protein binding | 1.88087411289001 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.72533206529661 | bayes_pls_golite062009 |
| transcription repressor activity | 1.55910796763122 | bayes_pls_golite062009 |
| transcription activator activity | 1.36535925881104 | bayes_pls_golite062009 |
| transcription factor binding | 1.05399367242529 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.7265140277161 | bayes_pls_golite062009 |
| chromatin binding | 0.572427333286789 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.49703800163515 | bayes_pls_golite062009 |
