| Protein: | nas-30 |
| Organism: | Caenorhabditis elegans |
| Length: | 710 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-30.
| Description | E-value | Query Range |
Subject Range |
|
|
650.0 | [0..1] | [710..37] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MYMIQGCYIP AKSDKILETI FSDAPPVYRQ PRTKAEKIER FRNIARTFSP FVYEVNTTPA 60
61 PHFDNFIWQQ NAPAVTPEPF TFAPFSFPTL ATVAPPAPGP GGPTLEPFLP TTASPKLLAH 120
121 NTARMIREIA S
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [132-198] |
1 11 21 31 41 51
| | | | | |
1 FSDGGRSRDQ DFGAVQTLMQ AFFEAVSSGN NGGAGAAAGA GTALGDAPML QAHRDGTELG 60
61 ANRALTN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [199-346] |
1 11 21 31 41 51
| | | | | |
1 KLFESDMVLT VKQMKAIVLA AQEARNPHGR KKRKVITGSV YRWKSVIPFR FKGGDAKWKK 60
61 LIREGLGLWE KETCVRWSEN GPGKDYVIFF RGSGCYSSVG RTGGSQLISI GYGCEDKGIV 120
121 AHEVGHSLGF WHEQSRPDRD DYIHLRKD
|
| Detection Method: | |
| Confidence: | 38.39794 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 3.87713655504947 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.50720289959102 | bayes_pls_golite062009 |
| metallopeptidase activity | 2.55317823694462 | bayes_pls_golite062009 |
| endopeptidase activity | 2.52973705827479 | bayes_pls_golite062009 |
| hydrolase activity | 2.30803642767787 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 1.81132179546381 | bayes_pls_golite062009 |
| catalytic activity | 1.26162753036584 | bayes_pls_golite062009 |
| exopeptidase activity | 0.71491631246151 | bayes_pls_golite062009 |
| binding | 0.499447555214981 | bayes_pls_golite062009 |
|
Region A: Residues: [347-575] |
1 11 21 31 41 51
| | | | | |
1 WIIKGTDGNF EKRSWEEIED MGVPYDVGSV MHYGSNAFTK DWDQITIETK DSRYQGTIGQ 60
61 RQKLSFIDVK QVNRLYCNSV CPVALPCMHG GYPDPNNCAV CKCPDGLGGK LCGRAAKGTD 120
121 HDKCGGELTA TAEWQEMVYK GKRTCNWKVK SPSGGRVRLV LTELRYQCAP ACKAYIEIKH 180
181 NTDFQQTGFR VCCFNKTYDV ISDQSEALIL SNANIVDYEV SYKLQWIQG
|
| Detection Method: | |
| Confidence: | 23.221849 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 1.72322649047672 | bayes_pls_golite062009 |
| binding | 1.49179346522265 | bayes_pls_golite062009 |
| protein binding | 1.279921135544 | bayes_pls_golite062009 |
| receptor binding | 1.07208480206832 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.759649002808058 | bayes_pls_golite062009 |
| hydrolase activity | 0.647380592098528 | bayes_pls_golite062009 |
| endopeptidase activity | 0.58509255952441 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 0.437338899624441 | bayes_pls_golite062009 |
| catalytic activity | 0.34605294925773 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 0.17164197559882 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0602233721007337 | bayes_pls_golite062009 |
| growth factor activity | 0.04792804882584 | bayes_pls_golite062009 |
|
Region A: Residues: [576-710] |
1 11 21 31 41 51
| | | | | |
1 TPPPPPFLSI ERTFFQTTEK LFHHRNPRRP GCPEKRIDHS AEWRTRAAPS KSSSCKRSQR 60
61 SETRIGHWRV LLVLLRNMVS QRYLVYRIME SSPFGTIFAI VRGIYIYICK FCTIPKIQFF 120
121 FHNFQNLLIF HNYSG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
