| Protein: | 4MMP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 342 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 4MMP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
302.0 | [0..17] | [341..1] |
|
Region A: Residues: [1-342] |
1 11 21 31 41 51
| | | | | |
1 MHHHHHPCNR KPFTTIFSFF LLYLNLHNQQ IIEARNPSQF TTNPSPDVSI PEIKRHLQQY 60
61 GYLPQNKESD DVSFEQALVR YQKNLGLPIT GKPDSDTLSQ ILLPRCGFPD DVEPKTAPFH 120
121 TGKKYVYFPG RPRWTRDVPL KLTYAFSQEN LTPYLAPTDI RRVFRRAFGK WASVIPVSFI 180
181 ETEDYVIADI KIGFFNGDHG DGEPFDGVLG VLAHTFSPEN GRLHLDKAET WAVDFDEEKS 240
241 SVAVDLESVA VHEIGHVLGL GHSSVKDAAM YPTLKPRSKK VNLNMDDVVG VQSLYGTNPN 300
301 FTLNSLLASE TSTNLADGSR IRSQGMIYST LSTVIALCFL NW
|
| Detection Method: |  |
| Confidence: | 73.69897 |
| Match: | 1su3A |
| Description: | X-ray structure of human proMMP-1: New insights into collagenase action |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.33358263548929 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.99457783001146 | bayes_pls_golite062009 |
| endopeptidase activity | 4.16532996235931 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.94798058866011 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 3.43236442601127 | bayes_pls_golite062009 |
| hydrolase activity | 2.63109625301237 | bayes_pls_golite062009 |
| receptor binding | 2.39767049122449 | bayes_pls_golite062009 |
| exopeptidase activity | 2.07461908743946 | bayes_pls_golite062009 |
| binding | 1.08558665967526 | bayes_pls_golite062009 |
| catalytic activity | 0.891187593353827 | bayes_pls_golite062009 |
| growth factor activity | 0.720944017870466 | bayes_pls_golite062009 |
| integrin binding | 0.57684135424992 | bayes_pls_golite062009 |
| zinc ion binding | 0.49304764842799 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.489265029264191 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.393080846858665 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.374597710524442 | bayes_pls_golite062009 |
| protein binding | 0.2751534129453 | bayes_pls_golite062009 |
| peptidyl-dipeptidase activity | 0.27229268642689 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.252655558968584 | bayes_pls_golite062009 |
| cytokine receptor binding | 0.0255053415182105 | bayes_pls_golite062009 |
| ion binding | 0.0127744064783182 | bayes_pls_golite062009 |
