| Protein: | 5MMP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 360 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 5MMP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
299.0 | [0..27] | [359..2] |
|
Region A: Residues: [1-360] |
1 11 21 31 41 51
| | | | | |
1 MRTLLLTILI FFFTVNPISA KFYTNVSSIP PLQFLNATQN AWETFSKLAG CHIGENINGL 60
61 SKLKQYFRRF GYITTTGNCT DDFDDVLQSA INTYQKNFNL KVTGKLDSST LRQIVKPRCG 120
121 NPDLIDGVSE MNGGKILRTT EKYSFFPGKP RWPKRKRDLT YAFAPQNNLT DEVKRVFSRA 180
181 FTRWAEVTPL NFTRSESILR ADIVIGFFSG EHGDGEPFDG AMGTLAHASS PPTGMLHLDG 240
241 DEDWLISNGE ISRRILPVTT VVDLESVAVH EIGHLLGLGH SSVEDAIMFP AISGGDRKVE 300
301 LAKDDIEGIQ HLYGGNPNGD GGGSKPSRES QSTGGDSVRR WRGWMISLSS IATCIFLISV 360
361
|
| Detection Method: |  |
| Confidence: | 73.69897 |
| Match: | 1su3A |
| Description: | X-ray structure of human proMMP-1: New insights into collagenase action |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.33358263548929 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.99457783001146 | bayes_pls_golite062009 |
| endopeptidase activity | 4.16532996235931 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.94798058866011 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 3.43236442601127 | bayes_pls_golite062009 |
| hydrolase activity | 2.63109625301237 | bayes_pls_golite062009 |
| receptor binding | 2.39767049122449 | bayes_pls_golite062009 |
| exopeptidase activity | 2.07461908743946 | bayes_pls_golite062009 |
| binding | 1.08558665967526 | bayes_pls_golite062009 |
| catalytic activity | 0.891187593353827 | bayes_pls_golite062009 |
| growth factor activity | 0.720944017870466 | bayes_pls_golite062009 |
| integrin binding | 0.57684135424992 | bayes_pls_golite062009 |
| zinc ion binding | 0.49304764842799 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.489265029264191 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.393080846858665 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.374597710524442 | bayes_pls_golite062009 |
| protein binding | 0.2751534129453 | bayes_pls_golite062009 |
| peptidyl-dipeptidase activity | 0.27229268642689 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.252655558968584 | bayes_pls_golite062009 |
| cytokine receptor binding | 0.0255053415182105 | bayes_pls_golite062009 |
| ion binding | 0.0127744064783182 | bayes_pls_golite062009 |
