| Protein: | CSN2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 439 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..6] | [438..12] |
|
Region A: Residues: [1-350] |
1 11 21 31 41 51
| | | | | |
1 MASDADMEDY GFEYSDEEQE EQDVDIENQY YNSKGMVETE PEEALSGFAE VVQMEPEKAD 60
61 WGFKALKQTV KIYYRLGKYK EMMEAYTEML TYIKSAVTRN YSEKCINNIM DFVSGSASQN 120
121 TGLLQEFYQT TLKALEEAKN ERLWFKTNLK LCNIWFDIGE YRRMTKILKE LHKSCQKEDG 180
181 TDDQKKGSQL LEVYAIEIQI YTETKDNKKL KQLYHKALAI KSAIPHPRIM GIIRECGGKM 240
241 HMAERQWEEA ATDFFEAFKN YDEAGNQRRI QCLKYLVLAN MLMESEVNPF DGQEAKPYKN 300
301 DPEILAMTNL IAAYQRNEII EFERILKSNR RTIMDDPFIR NYMEDLLKKV
|
| Detection Method: |  |
| Confidence: | 4.045757 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
|
Region A: Residues: [351-439] |
1 11 21 31 41 51
| | | | | |
1 RTQVLLKLIK PYTKIGIPFI SKELNVPETD VTELLVSLIL DSRIDGHIDE MNRYLLRGDS 60
61 GNGRKLHKAV DKWNSQLKSL SSNITSRVC
|
| Detection Method: | |
| Confidence: | 2.94 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.23858959608048 | bayes_pls_golite062009 |
| DNA binding | 4.78517210147551 | bayes_pls_golite062009 |
| nucleic acid binding | 4.72059012764202 | bayes_pls_golite062009 |
| transcription factor activity | 4.02736190679869 | bayes_pls_golite062009 |
| transcription repressor activity | 3.60278632732466 | bayes_pls_golite062009 |
| binding | 3.37660003833383 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.41045867230388 | bayes_pls_golite062009 |
| hydrolase activity | 2.37143167527915 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.21432668306508 | bayes_pls_golite062009 |
| transcription activator activity | 2.13702350917359 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.28416365596732 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.23579329819576 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.12766532785895 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.761838897494019 | bayes_pls_golite062009 |
| transcription factor binding | 0.752335897765285 | bayes_pls_golite062009 |
| protein binding | 0.726445167461826 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.710995647413393 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.49516964123412 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.490809930581315 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.281229260644949 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.252392400929265 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.237208016899812 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.171423850692861 | bayes_pls_golite062009 |
| transferase activity | 0.10058871838551 | bayes_pls_golite062009 |
