| Protein: | PUB53_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 819 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB53_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
442.0 | [0..31] | [816..19] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MDSFFKNSYL DPKAVRAQLP KRADLAAPSE PMTVALAISG SIKSKNVIKW ALNKFGSDKN 60
61 VTFKLIHIHP KITTLPTASG NIVSISEELE EVAAAYRQKV MQETKETLLK PFKKMCERKK 120
121 LKIDETRFES SLTKVAVELQ VLESNSVAVA ITKEVNQHLI SNLIIGRSSQ AASSRNYDIT 180
181 AS
|
| Detection Method: |  |
| Confidence: | 4.18 |
| Match: | 1mjhA |
| Description: | "Hypothetical" protein MJ0577 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.41117326920761 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.26442306623052 | bayes_pls_golite062009 |
| ligase activity | 1.03935946034745 | bayes_pls_golite062009 |
| catalytic activity | 0.787684509305028 | bayes_pls_golite062009 |
| nucleic acid binding | 0.458285295466831 | bayes_pls_golite062009 |
| transferase activity | 0.430210086388799 | bayes_pls_golite062009 |
| DNA binding | 0.360053842784207 | bayes_pls_golite062009 |
| protein binding | 0.0453128337458996 | bayes_pls_golite062009 |
|
Region A: Residues: [183-745] |
1 11 21 31 41 51
| | | | | |
1 ISASVSNLCT VYVVSNGGVH ILAKDTSDTE RNDTSIESGF ERTSSSCSSG SGANSDVMSN 60
61 ALKSNPHTLS NKRMQNLPTI VRGVSVPMET SSTESDETKK RSSDAAEEAS KRSSPETSRS 120
121 VSWNPQFRDF DERKDAMSSM SSNFEYGNVV TPLGHYFTDN QDTLNEISKL RAELRHAHEM 180
181 YAVAQVETLD ASRKLNELKF EELTLLEHET KGIAKKETEK FEQKRREERE AAQRREAEMK 240
241 ATHEAKEKEK LEESSLVAPK LQYQEFTWEE IINATSSFSE DLKIGMGAYG DVYKCNLHHT 300
301 IAAVKVLHSA ESSLSKQFDQ ELEILSKIRH PHLVLLLGAC PDHGALVYEY MENGSLEDRL 360
361 FQVNDSQPIP WFVRLRIAWE VASALVFLHK SKPTPIIHRD LKPANILLNH NFVSKVGDVG 420
421 LSTMIQAADP LSTKFTMYKQ TSPVGTLCYI DPEYQRTGRI SPKSDVYAFG MIILQLLTGQ 480
481 QAMALTYTVE TAMENNNDDE LIQILDEKAG NWPIEETRQL AALALQCTEL RSKDRPDLED 540
541 QILPVLESLK KVADKARNSL SAA
|
| Detection Method: | |
| Confidence: | 90.69897 |
| Match: | 2h8hA |
| Description: | No description for 2h8hA was found. |
| Term | Confidence | Notes |
| protein kinase activity | 5.4586557943719 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 5.04467222534257 | bayes_pls_golite062009 |
| kinase activity | 4.85903980916957 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.63692708178478 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 4.46381887831481 | bayes_pls_golite062009 |
| transferase activity | 3.26787750561728 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 2.8153155526437 | bayes_pls_golite062009 |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| molecular transducer activity | 2.40586892801446 | bayes_pls_golite062009 |
| signal transducer activity | 2.40586892801446 | bayes_pls_golite062009 |
| receptor signaling protein activity | 2.10379226653669 | bayes_pls_golite062009 |
| ATP binding | 1.97600611746091 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.93596671856664 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.90928021591891 | bayes_pls_golite062009 |
| receptor signaling protein serine/threonine kinase activity | 1.81249386965144 | bayes_pls_golite062009 |
| molecular adaptor activity | 1.81145713371725 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.7769021678395 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.6878868450299 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.65732943334212 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.65726906484847 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.63763394711025 | bayes_pls_golite062009 |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
| SH3/SH2 adaptor activity | 1.59474164216385 | bayes_pls_golite062009 |
| receptor activity | 1.57112777506542 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.4571078357189 | bayes_pls_golite062009 |
| protein binding | 1.22565748038754 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| protein binding, bridging | 0.83823250804321 | bayes_pls_golite062009 |
| MAP kinase activity | 0.81943579965027 | bayes_pls_golite062009 |
| MAP kinase kinase activity | 0.610230065465794 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.499492353295369 | bayes_pls_golite062009 |
| magnesium ion binding | 0.393328812780268 | bayes_pls_golite062009 |
| insulin receptor activity | 0.35140991120688 | bayes_pls_golite062009 |
| insulin binding | 0.326213234151689 | bayes_pls_golite062009 |
| phosphoinositide 3-kinase binding | 0.30293890086301 | bayes_pls_golite062009 |
| kinase binding | 0.26752427107238 | bayes_pls_golite062009 |
| transforming growth factor beta receptor activity | 0.26602283402868 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase activity | 0.26602283402868 | bayes_pls_golite062009 |
| growth factor binding | 0.0526340287295695 | bayes_pls_golite062009 |
| PTB domain binding | 0.0449060071013108 | bayes_pls_golite062009 |
| protein kinase binding | 0.00674998152095019 | bayes_pls_golite062009 |
|
Region A: Residues: [746-819] |
1 11 21 31 41 51
| | | | | |
1 PSQPPSHFFC PLLKDVMKEP CIAADGYTYD RRAIEEWMEN HRTSPVTNSP LQNVNLLPNH 60
61 TLYAAIVEWR NRNQ
|
| Detection Method: | |
| Confidence: | 58.0 |
| Match: | 2qoqA |
| Description: | No description for 2qoqA was found. |
