| Protein: | 1MMP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 364 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 1MMP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
327.0 | [0..1] | [364..1] |
|
Region A: Residues: [1-364] |
1 11 21 31 41 51
| | | | | |
1 MSRNLIYRRN RALCFVLILF CFPYRFGARN TPEAEQSTAK ATQIIHVSNS TWHDFSRLVD 60
61 VQIGSHVSGV SELKRYLHRF GYVNDGSEIF SDVFDGPLES AISLYQENLG LPITGRLDTS 120
121 TVTLMSLPRC GVSDTHMTIN NDFLHTTAHY TYFNGKPKWN RDTLTYAISK THKLDYLTSE 180
181 DVKTVFRRAF SQWSSVIPVS FEEVDDFTTA DLKIGFYAGD HGDGLPFDGV LGTLAHAFAP 240
241 ENGRLHLDAA ETWIVDDDLK GSSEVAVDLE SVATHEIGHL LGLGHSSQES AVMYPSLRPR 300
301 TKKVDLTVDD VAGVLKLYGP NPKLRLDSLT QSEDSIKNGT VSHRFLSGNF IGYVLLVVGL 360
361 ILFL
|
| Detection Method: |  |
| Confidence: | 74.39794 |
| Match: | 1su3A |
| Description: | X-ray structure of human proMMP-1: New insights into collagenase action |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.33358263548929 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.99457783001146 | bayes_pls_golite062009 |
| endopeptidase activity | 4.16532996235931 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.94798058866011 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 3.43236442601127 | bayes_pls_golite062009 |
| hydrolase activity | 2.63109625301237 | bayes_pls_golite062009 |
| exopeptidase activity | 2.07461908743946 | bayes_pls_golite062009 |
| catalytic activity | 0.891187593353827 | bayes_pls_golite062009 |
| zinc ion binding | 0.49304764842799 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.489265029264191 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.393080846858665 | bayes_pls_golite062009 |
| receptor binding | 0.392341313566282 | bayes_pls_golite062009 |
| binding | 0.391736565948141 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.374597710524442 | bayes_pls_golite062009 |
| peptidyl-dipeptidase activity | 0.27229268642689 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.252655558968584 | bayes_pls_golite062009 |
| ion binding | 0.038238114346522 | bayes_pls_golite062009 |
