| Protein: | PNSL5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 259 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNSL5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
321.0 | [0..1] | [259..1] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MATLSMTLSN PKSLSAPPRR LSPINTSAFT STSFRLRTKS SFDSISFSSS TPFSASSLLL 60
61 HTSYTKRNHR CFSVQSNAEV VTEPQS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.715 | d.1.1 | Microbial ribonucleases |
| View | Download | 0.655 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.624 | b.1.1 | Immunoglobulin |
| View | Download | 0.576 | d.200.1 | Integrin beta tail domain |
| View | Download | 0.555 | d.17.1 | Cystatin/monellin |
|
Region A: Residues: [87-259] |
1 11 21 31 41 51
| | | | | |
1 KITHKVYFDI SVGNPVGKLA GRIVIGLYGD DVPQTVENFR ALCTGEKGFG YKGSTFHRVI 60
61 RDFMIQGGDF EKGNGTGGKS VYGRTFKDEN FKLSHVGPGV LSMANAGPNT NGSQFFICTI 120
121 KTSWLDGRHV VFGQVIEGME VVKLIEEQET DRGDRPRKKV VIADCGQLPM SEA
|
| Detection Method: | |
| Confidence: | 70.221849 |
| Match: | 1awqA |
| Description: | Cyclophilin (eukaryotic) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 4.3775483906311 | bayes_pls_golite062009 |
| histone deacetylase activity | 4.29026678196473 | bayes_pls_golite062009 |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| deacetylase activity | 3.49940864924766 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.01511519120932 | bayes_pls_golite062009 |
| RNA binding | 2.94609837984526 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.46018233647024 | bayes_pls_golite062009 |
| mRNA binding | 1.45537055700871 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| nucleic acid binding | 0.939772862764466 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| hydrolase activity | 0.493806105600863 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.408539130322443 | bayes_pls_golite062009 |
| drug binding | 0.36339132904137 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.322244688184474 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.286133802341887 | bayes_pls_golite062009 |
| histone binding | 0.268719695649015 | bayes_pls_golite062009 |
| protein binding | 0.130251391659493 | bayes_pls_golite062009 |
