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View Structure Prediction Details

Protein: tag-196
Organism: Caenorhabditis elegans
Length: 477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-196.

Description E-value Query
Range
Subject
Range
gi|187038193, gi... - gi|39581574|emb|CAE58359.1| Hypothetical protein CBG01480 [Caenorhabditis briggsae], gi|187038193|em...
gi|157760167 - gi|157760167|ref|XP_001672426.1| Hypothetical protein CBG01480 [Caenorhabditis briggsae AF16]
412.0 [0..1] [477..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKPIVCLIL LLASLHTVVS KVLPINEEDQ LLYEKFARHG VEKFNQQSND AYKWELDRTW  60
   61 EVERKLSGGI HYSIFVTLVK TDCKKGQTDV EGKKCRKTDT LKKCQVEISR RVKRHGYGLK 120
  121 DIVHIRNCEE EFTRNIDKFD HRKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.09691
Match: 1g96A
Description: Cystatin C
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protease binding 2.33924947399883 bayes_pls_golite062009
endopeptidase inhibitor activity 2.281153350492 bayes_pls_golite062009
peptidase inhibitor activity 2.2751983744098 bayes_pls_golite062009
cysteine-type endopeptidase inhibitor activity 1.5023849476868 bayes_pls_golite062009
binding 1.35239730089344 bayes_pls_golite062009
enzyme inhibitor activity 1.2246857430038 bayes_pls_golite062009
protein binding 0.723461675092055 bayes_pls_golite062009
structural molecule activity 0.410373379064067 bayes_pls_golite062009
enzyme regulator activity 0.364835684922551 bayes_pls_golite062009
enzyme binding 0.2069873067106 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [145-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLTHDDSITV QELRKAKIIR PRDYVIWNSF LDFVDRHEKK YTNKREVLKR FRVFKKNAKV  60
   61 IRELQKNEQG TAVYGFTKFS DMTTMEFKKI MLPYQWEQPV YPMEQANFEK HDVTINEEDL 120
  121 PESFDWREKG AVTQVKNQGN CGSCWAFSTT GNVEGAWFIA KNKLVSLSEQ ELVDCDSMDQ 180
  181 GCNGGLPSNA YKEIIRMGGL EPEDAYPYDG RGETCHLVRK DIAVYINGSV ELPHDEVEMQ 240
  241 KWLVTKGPIS IGLNANTLQF YRHGVVHPFK IFCEPFMLNH GVLIVGYGKD GRKPYWIVKN 300
  301 SWGPNWGEAG YFKLYRGKNV CGVQEMATSA LVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.221849
Match: 1cs8A
Description: (Pro)cathepsin L
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 4.90619850296986 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 4.64381885397949 bayes_pls_golite062009
endopeptidase activity 3.75054525912786 bayes_pls_golite062009
hydrolase activity 3.74079711298952 bayes_pls_golite062009
cysteine-type peptidase activity 2.71117522993364 bayes_pls_golite062009
cysteine-type endopeptidase activity 1.95802900199539 bayes_pls_golite062009
binding 1.29265216891074 bayes_pls_golite062009
cytoskeletal protein binding 1.12653729823589 bayes_pls_golite062009
catalytic activity 1.05972260874031 bayes_pls_golite062009
protein binding 0.774177093888744 bayes_pls_golite062009
small conjugating protein-specific protease activity 0.649171767629235 bayes_pls_golite062009
thiolester hydrolase activity 0.59115205419466 bayes_pls_golite062009
kininogen binding 0.41283715939055 bayes_pls_golite062009
structural molecule activity 0.102555314244558 bayes_pls_golite062009
signal transducer activity 0.0533173282158101 bayes_pls_golite062009
molecular transducer activity 0.0533173282158101 bayes_pls_golite062009
tubulin binding 0.0482209771629902 bayes_pls_golite062009
ubiquitin-specific protease activity 0.0101379718864654 bayes_pls_golite062009
microtubule binding 0.00635493133568055 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle