| Protein: | cul-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 774 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cul-2.
| Description | E-value | Query Range |
Subject Range |
|
|
726.0 | [0..7] | [774..219] |
|
Region A: Residues: [1-774] |
1 11 21 31 41 51
| | | | | |
1 MYSLKPKVVE FDKVWVQLRP SIIDIINLRP ITNVQWHHKF SDVYDICVSI PTPLSERLYN 60
61 EVKACIQEHV RQKRQDIVDV DPDLLLQEYH KMWRVFHEGA IFIHRLFGYL NKQFVKQKRC 120
121 TDLDNFAQYA AFLQIPDVKE IGCLALEIWK EDLVKTILPQ LVKLLLIAID NDRKGNFPHI 180
181 ANEVSGVINS FVKMEETDFD VVPAEGARYK ARESTTAFYQ ESFEKPLLTD TEQYYSALAQ 240
241 KMLTDLSCSE YMEQVIVLLE QEEMRAKKYL HESSVEKVIT LCQKVMIKAH KDKLHAVCHD 300
301 LITNEENKDL RNMYRLLKPI QAGLSVMVKE FEEYVKKKGL EAVSRLTGEN VPQQFVENVL 360
361 RVYNKFNDMK TAVFMDDGEF SSGLDKALQG VVNSKEPGQS VPKASERLAR YTDGLLKKST 420
421 KGLSETDLEA KLDSAIVIFR YIEDKDIFQK FYSKMLANRL IASTSISMDA EELMINKLKQ 480
481 ACGYEFTSKL SRMFTDIGLS QELSNNFDKH IADIKTVQPD VKFVPTQTMI LQAGSWPLNA 540
541 PQLSTNSNNQ TAQDVANFHL PRILQPVIQE FEKFYTGKHN GRKLTWLFNM SQGDVRLTYL 600
601 DKQYVAQMYV YQMAALLCFE RRDAILVKDI GEEIGVSGDY LLKTIRTILD VTLLTCDDQN 660
661 LTADSLVRLN MSMTSKRMKF RLQAPQVNKA VEKEQEAVAN TVSQDRKYYM ECAIVRIMKT 720
721 RKVLKHNALV TEIMDQTKGR FSPDVPFIKK SIEDLIEKMY IQRTDQNDEY QYLA
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1u6gA |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 9.47178230940453 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 9.15192834197166 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.12051073361876 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 6.87003086224111 | bayes_pls_golite062009 |
| vasopressin activated calcium mobilizing receptor activity | 6.55844152294696 | bayes_pls_golite062009 |
| transcription regulator activity | 4.76121492612224 | bayes_pls_golite062009 |
| transcription factor activity | 3.7855017556511 | bayes_pls_golite062009 |
| ligase activity | 3.66453881539688 | bayes_pls_golite062009 |
| transcription repressor activity | 2.39237599101586 | bayes_pls_golite062009 |
| binding | 2.3219000606044 | bayes_pls_golite062009 |
| protein binding | 2.20237620151495 | bayes_pls_golite062009 |
| transcription activator activity | 2.05043065144612 | bayes_pls_golite062009 |
| nucleic acid binding | 1.54797684894025 | bayes_pls_golite062009 |
| DNA binding | 1.42215436462553 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.23862224095769 | bayes_pls_golite062009 |
| transporter activity | 0.891050405674973 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.648150681919233 | bayes_pls_golite062009 |
| transcription factor binding | 0.612315945412079 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.368917395770011 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| catalytic activity | 0.201606344181603 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.146182977030285 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.117670813298683 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.107671044044222 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0102780098866235 | bayes_pls_golite062009 |
