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View Structure Prediction Details

Protein: mmaa-1
Organism: Caenorhabditis elegans
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mmaa-1.

Description E-value Query
Range
Subject
Range
gi|76638353, gi|... - gi|76638353|ref|XP_869341.1| PREDICTED: similar to methylmalonic aciduria type A isoform 2 [Bos taur...
238.0 [0..10] [396..38]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVRSLLRVS RLTSASCRHA SLAVSSTPKP YIPSVTGVQK SMPFDNLLEQ YSRVHWDDSV  60
   61 TYDDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.0
Match: 2hjgA
Description: No description for 2hjgA was found.

Predicted Domain #2
Region A:
Residues: [66-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVQKLFKSLM SGSRAALASA ITLVESRHPT KRAQGNMLLK MVLDEEREKY KKFGRDSMIF  60
   61 RVGISGSPGV GKSSFIEALG AELTENRGKK VAVLTIDPTS AMTGGSVLGD LTRMQELSRN 120
  121 PKAYIRQSPT SGSLGGVTRG IHEAVILCEG AGYDIVIIET VGVGQSETSV SDMCDMMCLL 180
  181 LSPAHGDELQ GVKRGIMEMS DLLVVTKDDG DLKAKAKMTQ AEYISALKFM RPRLDVWRPK 240
  241 VMRSSIMDKE SVSEVCSSLY EFWDTIGESG DLERRRQDQM KKWMWNHVKD EIMSVFQKHP 300
  301 KIAHLAPKLE NEIRSGKITP GLAAETMIRT FFGV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 2qm7A
Description: No description for 2qm7A was found.

Predicted functions:

Term Confidence Notes
nucleoside-triphosphatase activity 2.03298441743645 bayes_pls_golite062009
pyrophosphatase activity 1.98617097875287 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 1.96633266544098 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.96437252410847 bayes_pls_golite062009
amino acid transmembrane transporter activity 1.59627719545436 bayes_pls_golite062009
transporter activity 1.5835033929282 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 1.53837763663408 bayes_pls_golite062009
organic acid transmembrane transporter activity 1.53657633349085 bayes_pls_golite062009
ATPase activity 1.44825977402161 bayes_pls_golite062009
transmembrane transporter activity 1.38807279858296 bayes_pls_golite062009
ATPase activity, coupled 1.30978934925464 bayes_pls_golite062009
binding 1.30723993395152 bayes_pls_golite062009
amine transmembrane transporter activity 1.17315498514759 bayes_pls_golite062009
active transmembrane transporter activity 1.03879628103677 bayes_pls_golite062009
hydrolase activity 1.03530755572346 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 0.950885142938701 bayes_pls_golite062009
primary active transmembrane transporter activity 0.949033593388493 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 0.918484127528225 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 0.917033090233205 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 0.915324862636953 bayes_pls_golite062009
purine nucleotide binding 0.836987306348926 bayes_pls_golite062009
purine ribonucleotide binding 0.833439952483443 bayes_pls_golite062009
ribonucleotide binding 0.833225286154786 bayes_pls_golite062009
nucleotide binding 0.826434767038468 bayes_pls_golite062009
branched-chain aliphatic amino acid transmembrane transporter activity 0.442220326523999 bayes_pls_golite062009
ATP binding 0.304960869395329 bayes_pls_golite062009
adenyl ribonucleotide binding 0.276351989242018 bayes_pls_golite062009
adenyl nucleotide binding 0.265030176892253 bayes_pls_golite062009
substrate-specific transporter activity 0.203102676509268 bayes_pls_golite062009
amino acid-transporting ATPase activity 0.147644650870465 bayes_pls_golite062009
amine-transporting ATPase activity 0.135455889967401 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle