| Protein: | drp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 705 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for drp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
683.0 | [0..1] | [705..1] |
|
Region A: Residues: [1-327] |
1 11 21 31 41 51
| | | | | |
1 MENLIPVVNK LQDVFATLGR KEDQIQLPQI VVVGSQSAGK SSVLENLVGR DFLPRGTGIV 60
61 TRRPLILQLN HVALDDESKR RRSNGTLLTD DWAMFEHTGS KVFTDFDAVR KEIEDETDRV 120
121 TGVNKGISLL PISLKIYSHR VVSLSLVDLP GITKIPVGDQ PVNIEEQIRE MILLYISNPS 180
181 SIILAVTPAN QDFATSEPIK LAREVDAGGQ RTLAVLTKLD LMDQGTDAMD VLMGKVIPVK 240
241 LGIIGVVNRS QQNILDNKLI VDAVKDEQSF MQKKYPTLAS RNGTPYLAKR LNMLLMHHIR 300
301 NCLPALKARV SIMNAQCQSD LVAFGEP
|
| Detection Method: |  |
| Confidence: | 107.0 |
| Match: | 2akaB |
| Description: | Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.74389108884083 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.67097555143215 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.65161658635465 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.64849912301318 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.50494515048649 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.39629638016861 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.39600931083427 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.36051733655256 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.35906629925754 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.35679406876731 | bayes_pls_golite062009 |
| ATPase activity | 2.2625504298178 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.24901251684901 | bayes_pls_golite062009 |
| binding | 2.01755875920323 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.65609907941094 | bayes_pls_golite062009 |
| motor activity | 1.47133910026814 | bayes_pls_golite062009 |
| protein transporter activity | 1.37245678118001 | bayes_pls_golite062009 |
| hydrolase activity | 1.34710139310747 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.3182108176243 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| microfilament motor activity | 0.723407201613229 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.704934361725919 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.568484017802328 | bayes_pls_golite062009 |
| actin binding | 0.563996324417607 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.46552249844591 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| signal recognition particle binding | 0.29390189699022 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.282397764628576 | bayes_pls_golite062009 |
| DNA strand annealing activity | 0.0887104483353087 | bayes_pls_golite062009 |
| protein binding | 0.071010918255742 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0636334376764289 | bayes_pls_golite062009 |
| signal transducer activity | 0.0529006651532686 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0529006651532686 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
|
Region A: Residues: [328-532] |
1 11 21 31 41 51
| | | | | |
1 VEDKNRTLLQ IITRFATAYT STIEGTARNI ETTELCGGAR ICYIFHDTFG RSLESVNPLE 60
61 NLTQLDILTA IRNATGPRPA LFVPEVSFEL LVKRQIQRLE EPSLRCVELV HEEMQRMVQH 120
121 CGFTTQQEMI RFPRLYDKIN EVVSGVLKER LKPTNELVEN LVAIELAYIN TKHPEFTEAN 180
181 LVTLLKEELL LDDRHGRSRN RHAST
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [533-604] |
1 11 21 31 41 51
| | | | | |
1 GERAQLQPVP GVNGVDLNAV LQQQQQQSQN QRASNGFLGL FGNAAASSKT SPQEKQSANF 60
61 LPEVPETQLG RK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [605-705] |
1 11 21 31 41 51
| | | | | |
1 LTSREQRDVA IIERLIRNYF IIVRKNIQDS VPKAIMALLV NFVRDNLQSE LVRQLYKPDE 60
61 MDDLLAETED MAQRRRDTLE TMKALQQASV IISEVRETQV W
|
| Detection Method: | |
| Confidence: | 28.161151 |
| Match: | PF02212.9 |
| Description: | No description for PF02212.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
