| Protein: | clp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 759 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
617.0 | [0..270] | [759..49] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MADDEEEIIQ KVEVKPDEFN GLIGSIAGNL IRDKVGGAGG DILGGLASNF FGGGGGGGGG 60
61 GGGGGFGGGN GGFGGGGGGS GGGGGGNNIG SLVGSLIGGG GGGGNYGGGG GNQGGGGGGG 120
121 FNFNDIGGLI NSMGGGGGGG QRQGGGGGGF GDILGGIGSL IGGGGGGQYN GGGGNVNPNN 180
181 LNGGMVNVIG NLIGEAAHRF LGVDPGTGRI IGAVAGNVIM GLGGKDNSLG NIGKVILDNI 240
241 ISGKFRRDVD PFVRPG
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 2quaA |
| Description: | No description for 2quaA was found. |
|
Region A: Residues: [257-759] |
1 11 21 31 41 51
| | | | | |
1 PDPDRGGGGS GPSPISPRPT TEPQDFYELR DQCLESKRLF EDPQFLANDS SLFFSKRPPK 60
61 RVEWLRPGEI TREPQLITEG HSRFDVIQGE LGDCWLLAAA ANLTLKDELF YRVVPPDQSF 120
121 TENYAGIFHF QFWQYGKWVD VVIDDRLPTS NGELLYMHSA SNNEFWSALL EKAYAKLFGS 180
181 YEALKGGTTS EALEDMTGGL TEFIDLKNPP RNLMQMMMRG FEMGSLFGCS IEADPNVWEA 240
241 KMSNGLVKGH AYSITGCRIV DGPNGQTCIL RIRNPWGNEQ EWNGPWSDNS REWRSVPDSV 300
301 KQDMGLKFDH DGEFWMSFDD FMRNFEKMEI CNLGPDVMDE VYQMTGVKAA GMVWAANTHD 360
361 GAWVRNQTAG GCRNYINTFA NNPQFRVQLT DSDPDDDDEL CTVIFAVLQK YRRNLKQDGL 420
421 DNVPIGFAVY DAGNNRGRLS KQFFAANKSA MRSAAFINLR EMTGRFRVPP GNYVVVPSTF 480
481 EPNEEAEFML RVYTNGFIES EEL
|
| Detection Method: | |
| Confidence: | 171.0 |
| Match: | 1kfuL |
| Description: | Calpain large subunit, C-terminal domain (domain IV); Calpain large subunit, middle domain (domain III); Calpain large subunit, catalytic domain (domain II) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 3.19059336788201 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 3.05412701733177 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.93596559605971 | bayes_pls_golite062009 |
| endopeptidase activity | 2.91734319991078 | bayes_pls_golite062009 |
| hydrolase activity | 2.43328552376748 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| protein binding | 1.92445772322782 | bayes_pls_golite062009 |
| binding | 1.92046698500094 | bayes_pls_golite062009 |
| transporter activity | 1.21845572420504 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.19670958990587 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.07520173658976 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.00091316610003 | bayes_pls_golite062009 |
| signal transducer activity | 0.9347662946007 | bayes_pls_golite062009 |
| molecular transducer activity | 0.9347662946007 | bayes_pls_golite062009 |
| calcium ion binding | 0.687204894708051 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.495368836247989 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.484449686814032 | bayes_pls_golite062009 |
| transcription regulator activity | 0.354062437867002 | bayes_pls_golite062009 |
| nucleic acid binding | 0.313326619937245 | bayes_pls_golite062009 |
| DNA binding | 0.306964954191276 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.246369226539662 | bayes_pls_golite062009 |
| calcium-dependent cysteine-type endopeptidase activity | 0.196538841514154 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.193338880082314 | bayes_pls_golite062009 |
| tubulin binding | 0.11107511867058 | bayes_pls_golite062009 |
