YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: vps-34
Organism: Caenorhabditis elegans
Length: 650 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vps-34.

Description E-value Query
Range
Subject
Range
vps-34 - phosphatidylinositol 3-kinase status:Confirmed UniProt:Q9TXI7 protein_id:AAF23184.1
534.0 [0..1] [650..252]

Back

Predicted Domain #1
Region A:
Residues: [1-650]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSTSVNGG VGIVSACTRY CVADPELLLE SLAEVKHSAM TRRIRDVEDE RHRQVKPNKQ  60
   61 AKDRLETIVN LPSSQVLTRE QRDLVWKFRH YLRQFPKALN KYLRSVNWVH PQEVKTALAL 120
  121 MNDWELIEAE DALELLSSAF THPAVRAYSV SRLLEAASPE QVLLYLPQLV QALKYEQGQQ 180
  181 LPEEGNPVPV VSEEEGKIPS VATTPTEELE GRDMTVVTKK EARKAASGDL ATFLIDYALA 240
  241 SPKVSNYLYW HLKTEIESTK ESKEEHSKMY QNIQDRLMEA LVKRPDTRAQ VDSLHQQQIF 300
  301 VEDLIILMNE AKARGGRLNE SKSAEFRTML SRAKHMLDLK GVHLPLDPSF RLSSVIPDTA 360
  361 SFFKSEMMPA KISFKVLQPN GKADRNIPEE YTVIFKTGDD LRQDQLIQQM VRLIDIILKK 420
  421 GQLDLKLTPY LVLSTGVGQG FVQCIKSKPL RAIQEQYKAH KMDCIREAMK ELRPGDGPFG 480
  481 IEPNVIDNYV RSLAGYSVIM YILGLGDRHL DNLLLCENGK LFHVDFGFIL GRDPKPMPPP 540
  541 MKLTSEMVQV MGGVKSKQFL EFVQHVDSAY RILRRHSNVL LNLFSLMLDA GIPDIAAEPD 600
  601 KAIFKIEQRL RLDLSDEAAT KHIFTQIESS LNAKMAMISD IIHAYKQNLM 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 1e7uA
Description: Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
protein kinase activity 5.17195961442593 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
1-phosphatidylinositol-3-kinase activity 3.36507457832455 bayes_pls_golite062009
phosphoinositide 3-kinase activity 3.35431422298319 bayes_pls_golite062009
lipid kinase activity 3.32869674544617 bayes_pls_golite062009
inositol or phosphatidylinositol kinase activity 3.07779388034304 bayes_pls_golite062009
binding 2.31930216202447 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
molecular transducer activity 1.79921740914853 bayes_pls_golite062009
signal transducer activity 1.79921740914853 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
protein tyrosine kinase activity 1.3898059094397 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.38496328649031 bayes_pls_golite062009
receptor signaling protein activity 1.27291233344322 bayes_pls_golite062009
protein binding 1.22565748038754 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
profilin binding 0.635898406235221 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.58590430118616 bayes_pls_golite062009
MAP kinase activity 0.5066845540941 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
phospholipid binding 0.304184566966103 bayes_pls_golite062009
phosphatidylinositol-4,5-bisphosphate 3-kinase activity 0.147483323744488 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.0556163711947139 bayes_pls_golite062009
transmembrane receptor activity 0.00652065412910241 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle