| Protein: | aqp-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 421 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aqp-3.
| Description | E-value | Query Range |
Subject Range |
|
|
360.0 | [0..14] | [421..14] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MLSDSSCSSS DRSFKFPFDT TDALSIHELA VKDLPKPDAE NPFSVAMHSP PGSPPFAVDR 60
61 KSVDNSVVAV TDTPFEFAPS QKSSQHTNRP PPFVKPEE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [99-421] |
1 11 21 31 41 51
| | | | | |
1 EMMYINHVER LKPKFAIGNE LIRAFLAELF CTGFLVFGGE CVNAQYVLSQ GKNNEWIGIS 60
61 VGWGLVLMLA VLMGSKISGA HLNPAVSFFQ LTQGKINLIR FLVYAVAQNI GAFLGAFGVF 120
121 CVYYDAINVF EGGNRTVTGP TATASIFATY PGPFLGTFNA IVDQIAGTLV LCLGVAAITD 180
181 RRNGIPAFLQ PAWIGALLAF LGMSLALNAG YAINPARDFA PRLFNLCAGY GWEVFSYRNY 240
241 KWFWIPIICP MIGGVLGAWL YEFFIGFHIQ DEDAVSLDSE SDKQLKTMID NMVDIENQLP 300
301 EYTDKKQLSD IASIHQNPSL RNI
|
| Detection Method: | |
| Confidence: | 58.522879 |
| Match: | 1fx8A |
| Description: | Glycerol uptake facilitator protein GlpF |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| water transmembrane transporter activity | 10.3414560257964 | bayes_pls_golite062009 |
| water channel activity | 10.2169080705067 | bayes_pls_golite062009 |
| amide transmembrane transporter activity | 8.22334514934522 | bayes_pls_golite062009 |
| urea channel activity | 8.22334514934522 | bayes_pls_golite062009 |
| urea transmembrane transporter activity | 8.22334514934522 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 6.84984722645819 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 6.65010837320829 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 6.65010837320829 | bayes_pls_golite062009 |
| substrate-specific channel activity | 6.49777654791183 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 6.47484344601535 | bayes_pls_golite062009 |
| channel activity | 6.47484344601535 | bayes_pls_golite062009 |
| transporter activity | 5.23077472964938 | bayes_pls_golite062009 |
| pyrimidine transmembrane transporter activity | 5.22583580934587 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 5.06520190871345 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.83314424546299 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.7450921192571 | bayes_pls_golite062009 |
| glycerol channel activity | 4.65460547189577 | bayes_pls_golite062009 |
| nitrate transmembrane transporter activity | 3.12629949459142 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.89377210429696 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.66719193997824 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 2.25733785698849 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.14052261196782 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity | 1.9587945604969 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 1.81483308784529 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.57078059027065 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 1.57017437613762 | bayes_pls_golite062009 |
| cation channel activity | 1.51074107596522 | bayes_pls_golite062009 |
| ion channel activity | 1.40084800732756 | bayes_pls_golite062009 |
| purine transmembrane transporter activity | 1.34339324336864 | bayes_pls_golite062009 |
| nucleobase transmembrane transporter activity | 1.34339324336864 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 1.16825682067665 | bayes_pls_golite062009 |
| binding | 1.07947257986943 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.315342449421593 | bayes_pls_golite062009 |
| protein binding | 0.279304481542405 | bayes_pls_golite062009 |
| structural molecule activity | 0.238570289302003 | bayes_pls_golite062009 |
