| Protein: | pmp-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 734 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pmp-4.
| Description | E-value | Query Range |
Subject Range |
|
|
494.0 | [0..63] | [705..4] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MSVQSKFLET GIDPEKRKKA LLVGAAGVAA VAVAHWVSLR KSQKSHHKME KEDSVASDGT 60
61 PKKNKKKA
|
| Detection Method: |  |
| Confidence: | 1.01 |
| Match: | 1zzaA |
| Description: | Solution NMR Structure of the Membrane Protein Stannin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [69-734] |
1 11 21 31 41 51
| | | | | |
1 FDPQFLKQLK ELLKIMIPGV FSKEAGIIGM HSIILICRTF LTIFVAQLEG SMVQAIVEKN 60
61 VLQFVLHLVK WILVALPATF VNSMIRFFES YLGLAFRTRL TKHAYKQYFS DQTYYAVSNL 120
121 DTRLQNADQC LTEDITMFSQ SVAHLYSHLT KPVLDVALIT FTLIKLAIQR GTGRSTFLPS 180
181 CMAIMAVSLT AKILRAVSPR FGHMVAEEAR RKGHLRYLHS RIITNSEEIA FYGGHQAEYK 240
241 QLDGAFNSLY QQMMLIFKKR IPYIMIEQFL MKYVWSGTGM VMIALPILAT EYADDEKSTK 300
301 LEDLPDRGVS ERTRGYATAK TLLFNSADAV ERLMTSYKEV TELAGYTGRV HEMFQVFDDA 360
361 KKGIYQRQTV SAGAEQGQRG ERFDTSKIEG IITDSEADEI ILNSVPIVTP NGDVVVKNMT 420
421 LTISPGMHVL ITGPNGCGKS SLFRILGGLW PVYRGHLEKP TSDRMYYIPQ RPYMTLGTLR 480
481 DQVIYPDTTI QMRRQGITDQ DLMTMLRIVH LEHIVEREGG WDAQNDWMDV LSGGEKQRMG 540
541 MARVFYHRPK YALLDECTSA VSIDVEGSIY QAIKDSGITL LTVTHRPSLW KFHTHLLQYD 600
601 GEGGYKVSSL NEKTIGERMS YSEEKQQLEK QLAEVPRWKE RLEEVCQLLG GNEDHLNMTI 660
661 DTDDSE
|
| Detection Method: | |
| Confidence: | 132.0 |
| Match: | 2hydA |
| Description: | No description for 2hydA was found. |
| Term | Confidence | Notes |
| ATPase activity, coupled to transmembrane movement of substances | 5.57844095962502 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 5.5689620139321 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 5.55992639965745 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 5.50005167063544 | bayes_pls_golite062009 |
| lipid transporter activity | 5.43964691043504 | bayes_pls_golite062009 |
| ATPase activity, coupled | 4.98276715440477 | bayes_pls_golite062009 |
| ATPase activity | 4.69795387297193 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 4.45923622153365 | bayes_pls_golite062009 |
| pyrophosphatase activity | 4.39781350157199 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 4.38133275795019 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 4.38085303582726 | bayes_pls_golite062009 |
| transporter activity | 3.71239480053329 | bayes_pls_golite062009 |
| hydrolase activity | 3.14498892233323 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.13960906549884 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.1318898376276 | bayes_pls_golite062009 |
| ATP binding | 3.01346604299372 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 2.96271391116269 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 2.91131545957759 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 2.70262534541085 | bayes_pls_golite062009 |
| ribonucleotide binding | 2.70178191749524 | bayes_pls_golite062009 |
| purine nucleotide binding | 2.6583477492092 | bayes_pls_golite062009 |
| nucleotide binding | 2.62374702628143 | bayes_pls_golite062009 |
| binding | 1.69327117652379 | bayes_pls_golite062009 |
| peptide-transporting ATPase activity | 1.37783759788533 | bayes_pls_golite062009 |
| peptide transporter activity | 1.19353064661766 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.08692822631118 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.977237423302079 | bayes_pls_golite062009 |
| motor activity | 0.87979065815418 | bayes_pls_golite062009 |
| GTPase activity | 0.83849854735032 | bayes_pls_golite062009 |
| cholesterol transporter activity | 0.644421039250979 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.557919489256916 | bayes_pls_golite062009 |
| sterol transporter activity | 0.51525091036229 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 0.48775834126327 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 0.38711726712063 | bayes_pls_golite062009 |
| protein binding | 0.378225828131122 | bayes_pls_golite062009 |
| catalytic activity | 0.368034275052766 | bayes_pls_golite062009 |
| fatty acid transporter activity | 0.278494397068437 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 0.213018989352421 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.123304946374679 | bayes_pls_golite062009 |
| microtubule motor activity | 0.11674780318211 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.0775601177068852 | bayes_pls_golite062009 |
