| Protein: | cul-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 729 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cul-6.
| Description | E-value | Query Range |
Subject Range |
|
|
703.0 | [0..1] | [729..221] |
|
Region A: Residues: [1-729] |
1 11 21 31 41 51
| | | | | |
1 MSIEAVWGTL QDGLNLLYRR EHMSKKYYMM LYDAVYNICT TTTLANSNNN SPEFASEFLY 60
61 KQLENYIRTY VIAIRDRISA CSGDELLGKC TIEWDNFKFS TRICNCIFQY LNRNFVSKKV 120
121 EDKNGEIVEI YKLALDIWKA EFFDNFKVKT IDAILELILL ERCGSTINST HISSVVECLT 180
181 ELDIYKVSFE PQFLDATKLF YKQEVLNSKE TVIEYMITVE NRLFQEEYRS RRYLGPSTND 240
241 LLIDSCESIL ISDRLKFLHS EFERLLEARK DEHLTRMYSL CRRVTHGLED LRVYLEKRIL 300
301 KEGHETLQRL AKDSGLKTTP KEYITKLLEV HEIYFNLINK AFDRNALFMQ SLDKASKDFI 360
361 EANAVTMLAP EKHRSTRSAD YLARYCDQLL KKNSKVQDET ALDKALTVLK YISEKDVFQL 420
421 YYQNWFSERI INNSSASDDA EEKFITNLTA TEGLEYTRNL VKMVEDAKIS KDLTTEFKDI 480
481 KTEKSIDFNV ILQTTGAWPS LDQIKIILPR ELSTILKEFD TFYNASHNGR RLNWAYSQCR 540
541 GEVNSKAFEK KYVFIVTASQ LCTLYLFNEQ DSFTIEQISK AIEMTAKSTS AIVGSLNPVI 600
601 DPVLVVDKGN EKDGYPPDAV VSLNTKYANK KVRVDLTTAI KKATADRETD AVQNTVESDR 660
661 KYEIKACIVR IMKTRKSLTH TLLINEIISQ LKSRFTPNVQ MIKICIEILI EQLYIRRSEN 720
721 EHNVYEYLA
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1u6gA |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 9.95820721075934 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 9.63704265478699 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.59660059921406 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 7.32718329074249 | bayes_pls_golite062009 |
| vasopressin activated calcium mobilizing receptor activity | 6.69190468636718 | bayes_pls_golite062009 |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| ligase activity | 4.08678005991666 | bayes_pls_golite062009 |
| transcription repressor activity | 3.85678231380989 | bayes_pls_golite062009 |
| binding | 2.45185337633142 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| protein binding | 2.34145982999922 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21939548334548 | bayes_pls_golite062009 |
| DNA binding | 2.06132216820898 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.33374581364046 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.96257232341735 | bayes_pls_golite062009 |
| transporter activity | 0.891050405674973 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| DNA replication origin binding | 0.71823621709622 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.697234220778482 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.648150681919233 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.368917395770011 | bayes_pls_golite062009 |
| catalytic activity | 0.351553138703956 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.322180400748724 | bayes_pls_golite062009 |
| DNA helicase activity | 0.300899564141452 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.286130392009263 | bayes_pls_golite062009 |
| structural molecule activity | 0.272316540117209 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.257777071965243 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.175575779922515 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.107671044044222 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0912115683429473 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
