| Protein: | pin-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 329 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pin-2.
| Description | E-value | Query Range |
Subject Range |
|
|
503.0 | [0..2] | [328..2532] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MTNAAQITKQ RNSGKRHRAC ERCREQFELN EPYFLLGASS WHMRCFLCAQ CMDPLVGTTY 60
61 FQFENRIYCE HDFKTLYAPV CAKCNEFVIG QVVHSSNNSY HLACFTCDEC NVHLNSQIAY 120
121 RYQGTILCFL CNQKKPK
|
| Detection Method: |  |
| Confidence: | 53.09691 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [138-329] |
1 11 21 31 41 51
| | | | | |
1 MRIYNCNKCK QHVDNSDLLT YQENPYHAYH FKCTTCKKVL ESDARTIKDD LFCPRCFDFK 60
61 CEVCFDCKKV IDPQVEQSIF TMNKHWHTDH FRCATCARPF FGHEHYEKNG KAYCRDDFLE 120
121 LIGHHCFICD RNVGGGMVHV FGKAFCPECY RCRGCDKVLH YKDKVMELDL MPLCKKCLGN 180
181 KTFQKALKYK SL
|
| Detection Method: | |
| Confidence: | 15.221849 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription activator activity | 3.52873291636993 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.53101891154822 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.22104591928521 | bayes_pls_golite062009 |
| chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
| protein binding | 2.05530362750351 | bayes_pls_golite062009 |
| transcription repressor activity | 1.64349785387632 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| molecular transducer activity | 1.12277938241964 | bayes_pls_golite062009 |
| signal transducer activity | 1.12277938241964 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.93314267845352 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| tubulin binding | 0.744315484113484 | bayes_pls_golite062009 |
| microtubule binding | 0.576452165256057 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.53991278722671 | bayes_pls_golite062009 |
| receptor activity | 0.36635758793995 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.10558148421807 | bayes_pls_golite062009 |
