| Protein: | SPBC887.18c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC887.18c.
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..11] | [326..50] |
|
|
310.0 | [0..2] | [268..25] |
|
|
306.0 | [0..2] | [268..25] |
|
|
304.0 | [0..1] | [258..23] |
|
|
293.0 | [0..8] | [264..33] |
|
|
286.0 | [0..7] | [257..1575] |
|
|
280.0 | [0..17] | [281..48] |
|
|
279.0 | [0..12] | [280..43] |
|
|
256.0 | [0..15] | [257..37] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MTEGVTVQKV QSASSNGHKP NTVISQIISE MQSLLGSSFE VYTKTMTDFL IGQLSRKEMK 60
61 SMLLTFAGKS NFDKLHNSII FHILKLMQKN NDTFSALHHL PWFKRKKVDN SLFLHKKISS 120
121 QNAQVRLIKR IVMS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [135-191] |
1 11 21 31 41 51
| | | | | |
1 LSYKDRARIK TALKEKPVTP SLISGLLLET RIAKLPKIPV SRDKLNSVFV NDIKAGY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [192-339] |
1 11 21 31 41 51
| | | | | |
1 VAPLACETLE LPDSESLKER ITAISLENGL LGGVQKGVSD IILAGLESHL KNILSRCFSI 60
61 LNKNIRQKNT ENDAAGFTIN DLNLAWTIEP HAFVEQYPQK LRMPFLLHDS YTEDEISICA 120
121 ESPSYMLASN DAQSDRNSVA SLLDEVLS
|
| Detection Method: | |
| Confidence: | 0.976 |
| Match: | 1h3oA |
| Description: | TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone acetyltransferase activity | 5.93249134612505 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.93249134612505 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.49084162254966 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 4.4864586197085 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.2172829451557 | bayes_pls_golite062009 |
| DNA binding | 4.00167809338753 | bayes_pls_golite062009 |
| transcription regulator activity | 3.91807454227165 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.91533222675137 | bayes_pls_golite062009 |
| nucleic acid binding | 3.72299085850948 | bayes_pls_golite062009 |
| binding | 3.67149228723241 | bayes_pls_golite062009 |
| acyltransferase activity | 3.38996237245502 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.35419529667223 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.18312128320637 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.02428691626433 | bayes_pls_golite062009 |
| transcription factor activity | 2.18855864512878 | bayes_pls_golite062009 |
| transcription initiation factor activity | 1.61443429710414 | bayes_pls_golite062009 |
| protein binding | 1.22636497573761 | bayes_pls_golite062009 |
| transcription activator activity | 1.12739348005764 | bayes_pls_golite062009 |
| transcription factor binding | 1.01773884290535 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.976797801726735 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.840442755533537 | bayes_pls_golite062009 |
| transcription repressor activity | 0.621482805601238 | bayes_pls_golite062009 |
| histone binding | 0.184823910505751 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.126825123711624 | bayes_pls_golite062009 |
