| Protein: | SPBC17A3.04c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 782 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC17A3.04c.
| Description | E-value | Query Range |
Subject Range |
|
|
513.0 | [0..11] | [782..2] |
|
|
503.0 | [0..11] | [780..2] |
|
|
503.0 | [0..11] | [781..2] |
|
|
503.0 | [0..11] | [781..1] |
|
|
501.0 | [0..11] | [781..2] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MATYKVQIPA SFKTSYSFAE SLKVSIAISA FSVKVPCEGA ANCNSVRLVN SKEPEKYVSD 60
61 ANAIVSFLYW KQEEDLFNSF ISSKLSILDW EALQFTPKAY TAKTKEDFAY LLSQLETIFK 120
121 ENEILNEFTP VEVALASDIY FCVLNGAPVR EYPLLSAWYL KIEKQKPFVQ ALKLTFEKTL 180
181 GQPAVTSTE
|
| Detection Method: |  |
| Confidence: | 21.522879 |
| Match: | 1aw9A |
| Description: | STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity | 1.71351657881838 | bayes_pls_golite062009 |
| catalytic activity | 0.672192331361968 | bayes_pls_golite062009 |
| transcription regulator activity | 0.605488421122121 | bayes_pls_golite062009 |
| nucleic acid binding | 0.46030380837916 | bayes_pls_golite062009 |
| binding | 0.235855919597681 | bayes_pls_golite062009 |
| DNA binding | 0.175092771820973 | bayes_pls_golite062009 |
|
Region A: Residues: [190-782] |
1 11 21 31 41 51
| | | | | |
1 KIPVSETTRN VNSQHLMRER VPGEKILPKS NERNILITSA LPYVNNVPHL GNIVGSTLSA 60
61 DVFARYHRAR NHNTLYICGT DEYGTATETK ALEEGVSPKE LCDKYHALHK EVYDWFEIDF 120
121 DHFGRTTTPK QTGIAQHIFT KLYNNDYMAI DTMTQLYCEV HQGYLADRYV EGTCPKCGYD 180
181 DARGDQCDGC GGLLNAFELI DPKCKLDRAT PVKRETKHVF LSLDKLQPAV ESWAMQSAVE 240
241 GKWSNNGRSI TESWLKEGLR PRCITRDLKW GTPVPLEEFK GKVLYVWFDA TIGYISITAN 300
301 YTDEWEKWWR NPEQVKLYQF MGKDNVPFHT VIFPSSLLGT GEKWTMLHHI NTTDYLNYET 360
361 GKFSKSRGVG VFGNTAQDIG LSPSVWRYYL LSSRPETSDT MFTWKEFITR HNSELLANLG 420
421 NFVNRTLKFT TAKYNGLVPH YLTDPSVGAG KLKADFVKDV NALLAKYNAA LEASKLREGL 480
481 RLAMEISARG NQYLQDNRID NKCYLYERQK CADAIGYALN LIYLLAAIFY PYMPSTSTSI 540
541 YKQLNAPAAA IPDTWELCLL PGHRIGEPEY LFTRIDESME EEWRSKYGGN GSN
|
| Detection Method: | |
| Confidence: | 110.0 |
| Match: | 1rqgA |
| Description: | Methionyl-tRNA synthetase from Pyrococcus abyssi |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 5.54691369460949 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 3.76808520367507 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.50161401062914 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.06535308346284 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
| nucleic acid binding | 0.449504767632354 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
| binding | 0.090743795600025 | bayes_pls_golite062009 |
