| Protein: | pst3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1154 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pst3.
| Description | E-value | Query Range |
Subject Range |
|
|
1216.0 | [0..1] | [1132..13] |
|
|
1215.0 | [0..1] | [1132..5] |
|
|
1214.0 | [0..1] | [1132..5] |
|
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1214.0 | [0..1] | [1132..5] |
|
|
1214.0 | [0..1] | [1132..5] |
|
|
1205.0 | [0..1] | [1132..5] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MDVMNVPVDS ERDNPGDKVE TQSDKNHLPK ASPSQSQSPV NTSLHNGDGK DNGVATEPVE 60
61 NKQILSERSV TRDDYEKGKT IVSSLALSSI SGKDGSISSQ NA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [103-209] |
1 11 21 31 41 51
| | | | | |
1 EGLSSSSNRP LDVNDALSYL ELVKYYFSER REIYNRFLEI MRDFKSQALD TLGVINRVSE 60
61 LFNGYPQLIE GFNTFLPSGY KIEVQLDSSN TSVVRVGTPM HPLPQQG
|
| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 2czyA |
| Description: | Solution structure of the NRSF/REST-mSin3B PAH1 complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [210-377] |
1 11 21 31 41 51
| | | | | |
1 VQSTLPVAPS NEDQRTMEST SPTDSQPQPS APNLVSSTEN EKPRVDFNYA IAYMNKVKAR 60
61 YPPNSDTYME FLGVLRTYQK AQKSIFEVRA RVAEIFKDSP DLLEEFKLFL PDNVDSTEPS 120
121 TPNVQKSPNR LPPVGNFSLP PSAPVREKRN RPAHSAQISR SISKTSRM
|
| Detection Method: | |
| Confidence: | 22.221849 |
| Match: | 2f05A |
| Description: | No description for 2f05A was found. |
| Term | Confidence | Notes |
| protein deacetylase activity | 9.15317765173842 | bayes_pls_golite062009 |
| histone deacetylase activity | 9.00540919224423 | bayes_pls_golite062009 |
| deacetylase activity | 7.91874136549804 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 6.08470985892139 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 4.91057345050982 | bayes_pls_golite062009 |
| transcription repressor activity | 4.58162229232685 | bayes_pls_golite062009 |
| transcription regulator activity | 3.97924147512738 | bayes_pls_golite062009 |
| transcription corepressor activity | 3.71696410617503 | bayes_pls_golite062009 |
| transcription factor binding | 3.06004981994503 | bayes_pls_golite062009 |
| transcription cofactor activity | 2.96293930027313 | bayes_pls_golite062009 |
| DNA binding | 2.90699688513784 | bayes_pls_golite062009 |
| nucleic acid binding | 2.89854237920034 | bayes_pls_golite062009 |
| binding | 2.65480555250736 | bayes_pls_golite062009 |
| transcription factor activity | 2.07660852403223 | bayes_pls_golite062009 |
| protein binding | 1.46569798429756 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.06494495723884 | bayes_pls_golite062009 |
| transcription activator activity | 0.63586266373929 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.599183685811182 | bayes_pls_golite062009 |
| catalytic activity | 0.289349813503192 | bayes_pls_golite062009 |
|
Region A: Residues: [378-529] |
1 11 21 31 41 51
| | | | | |
1 YRQTAEEPLN SYSLHVYPQK ITAPTSPYAA TQEELLAFTT IRQHLPDTLA FHKFLELLHL 60
61 YREKLLDKTE LLNSFSKLVR NDNLTLWFSE FIRWSDNPIL VKNEPVDERV YLPETFECIS 120
121 LTYRKLPDSW KQDKCSGRDD LDNSVLNDDY IS
|
| Detection Method: | |
| Confidence: | 2.5 |
| Match: | 2f05A |
| Description: | No description for 2f05A was found. |
| Term | Confidence | Notes |
| protein deacetylase activity | 8.92489148049718 | bayes_pls_golite062009 |
| histone deacetylase activity | 8.77562367748348 | bayes_pls_golite062009 |
| deacetylase activity | 7.74805102638387 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 5.99241841178307 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 4.85992273034906 | bayes_pls_golite062009 |
| transcription repressor activity | 4.25514230798992 | bayes_pls_golite062009 |
| transcription regulator activity | 3.82193713323077 | bayes_pls_golite062009 |
| transcription corepressor activity | 3.30769773581294 | bayes_pls_golite062009 |
| nucleic acid binding | 2.83214064778422 | bayes_pls_golite062009 |
| DNA binding | 2.82083682611814 | bayes_pls_golite062009 |
| transcription factor binding | 2.73494763175272 | bayes_pls_golite062009 |
| transcription cofactor activity | 2.59356984380124 | bayes_pls_golite062009 |
| binding | 2.59005615358803 | bayes_pls_golite062009 |
| transcription factor activity | 1.99794029160509 | bayes_pls_golite062009 |
| protein binding | 1.36724461365736 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.918453145717461 | bayes_pls_golite062009 |
| transcription activator activity | 0.570282420961288 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.512364998565023 | bayes_pls_golite062009 |
| catalytic activity | 0.30211814650972 | bayes_pls_golite062009 |
|
Region A: Residues: [530-760] |
1 11 21 31 41 51
| | | | | |
1 VAPKPSHVKN IMHHENQYLQ ALQLVEDERY DYDRVLNTTE SAIKILANFC EPTIHEHLET 60
61 ALQELERSKR IIKNALIIVY GKEHANLALD TLFKKLPTAA PVLLKRIKTK DQEWRRSKRE 120
121 WSKIWRQIEK KNAQAAFDDR YCRIEGRDRR GLSYSRILRD IDDIYQRQKH RIDGAKLGFQ 180
181 FTQVLCDSLI FLNILRLSDA QLTNSSFYSY ADKGRISAVL KALLSQFFGI P
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [761-829] |
1 11 21 31 41 51
| | | | | |
1 LPREALETNL ASENIESVKK HRDGLSKIFI RPESADNSNN TNVSFQTDET QTEDETMSDI 60
61 HPDDVENHS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [830-1003] |
1 11 21 31 41 51
| | | | | |
1 KSKFLGEESK NIIGYNFFGN ATMYVLFRLI CVCYSRLEHI KLFVESSTIY ASSTGGYENI 60
61 LNICEKYLKG SCSRLEFRKY LQKFNNETCY MICSIERLLK VIFYRIHEIL LDPKLGQLLL 120
121 LFESDGANSV TTPREQMVYR NHVESILAPE SKIFNMRWYP LEKRLCIQQL LPAD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1004-1154] |
1 11 21 31 41 51
| | | | | |
1 LTMHDFENPA KAFMYYVDSY AISHITEGVD LMQVKMPFLR RSLQRISQQG YLAGRGSGRL 60
61 HSLFNEHFCK SNLQLFFSTD TYVIFFEPNT ENVYINSYNL WVDQSSQSKK QNRTTNWRRW 120
121 LESDEGWRKS KANTDIKFFS ETTLDQCIEA M
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
