| Protein: | SPAC20G8.09c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1033 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC20G8.09c.
| Description | E-value | Query Range |
Subject Range |
|
|
1284.0 | [0..1] | [1032..1] |
|
|
1284.0 | [0..1] | [1031..1] |
|
|
1277.0 | [0..1] | [1032..1] |
|
|
1275.0 | [0..1] | [1032..1] |
|
|
1267.0 | [0..1] | [1033..1] |
|
|
1263.0 | [0..1] | [1032..4] |
|
|
1260.0 | [0..1] | [1031..1] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MPKKALDSRI PTLIKNGCQE KQRSFFVVVG DRARDQVVNL HWLLSQSKVA ARPNVLWMYK 60
61 KDLLGFTSHR KKRENKIKKE IKRGIRDPNS ED
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [93-222] |
1 11 21 31 41 51
| | | | | |
1 PFELFCSITN IRYCYYKESE KILGQTYGML VLQDFEALTP NLLARTIETV EGGGIVVLLL 60
61 HKLNSLKQLY TMSMDIHSRY RTEAHSDVTA RFNERFILSL GNCENCLVID DELNVLPISG 120
121 GKNVKALPPT
|
| Detection Method: | |
| Confidence: | 60.200659 |
| Match: | PF08351.2 |
| Description: | No description for PF08351.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [223-754] |
1 11 21 31 41 51
| | | | | |
1 LEEDNSTQNS IKELQESLGE DHPAGALVGV TKTLDQARAV LTFVESIVEK SLKGTVSLTA 60
61 GRGRGKSAAL GLAIAAAIAH GYSNIFITSP SPENLKTLFE FIFKGFDALN YEEHVDYDII 120
121 QSTNPAYHNA IVRVNIFRDH RQTIQYISPE DSNVLGQAEL VVIDEAAAIP LPLVRKLIGP 180
181 YLVFMASTIN GYEGTGRSLS LKLLQQLREQ SRIYSGSGNN KSDSQSHISG RTLKEISLDE 240
241 PIRYAMGDRI ELWLNKLLCL DAASYVSRMA TQGFPHPSEC SLYRVSRDTL FSYHPISEAF 300
301 LQRMMSLYVA SHYKNSPNDL QLMSDAPAHQ LFVLLPPVDL KNPKLPDPIC VIQLALEGSI 360
361 SRESIMNSLS RGQRAGGDLI PWLISQQFQD ENFAALGGAR IVRIAVSPEH VKMGYGTRAM 420
421 QLLHEYFEGK FISASEEFKA VKHSLKRIGD EEIENTALQT EKIHVRDAKT MPPLLLKLSE 480
481 LQPEPLHYVG VSYGLTPSLQ KFWKREGYCP LYLRQTANDL TGEHTCVMLR VL
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 1uaaA |
| Description: | DEXX box DNA helicase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 2.58352785213483 | bayes_pls_golite062009 |
| binding | 2.3830857772509 | bayes_pls_golite062009 |
| structural molecule activity | 1.70306030734033 | bayes_pls_golite062009 |
| RNA helicase activity | 1.40594009629203 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.38650114394757 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.372924601535 | bayes_pls_golite062009 |
| helicase activity | 1.17712281740941 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.12969667337016 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.12969667337016 | bayes_pls_golite062009 |
| RNA binding | 0.90930722867621 | bayes_pls_golite062009 |
| nucleic acid binding | 0.61841039337932 | bayes_pls_golite062009 |
| 0.506052368661833 | bayes_pls_golite062009 | |
| DNA binding | 0.327221599656875 | bayes_pls_golite062009 |
| transcription regulator activity | 0.179080000736404 | bayes_pls_golite062009 |
| protein binding | 0.102043618157662 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0283323446458181 | bayes_pls_golite062009 |
|
Region A: Residues: [755-1033] |
1 11 21 31 41 51
| | | | | |
1 EGRDSEWLGA FAQNFYRRFL SLLGYQFREF AAITALSVLD ACNNGTKYVV NSTSKLTNEE 60
61 INNVFESYDL KRLESYSNNL LDYHVIVDLL PKLAHLYFSG KFPDSVKLSP VQQSVLLALG 120
121 LQYKTIDTLE KEFNLPSNQL LAMLVKLSKK IMKCIDEIET KDIEEELGSN KKTESSNSKL 180
181 PEFTPLQQSL EEELQEGADE AMLALREKQR ELINAIDLEK YAIRGNEEDW KAAENQIQKT 240
241 NGKGARVVSI KGEKRKNNSL DASDKKTKEK PSSKKKFRK
|
| Detection Method: | |
| Confidence: | 12.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
