| Protein: | slx8 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 269 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for slx8.
| Description | E-value | Query Range |
Subject Range |
|
|
134.0 | [0..1] | [256..675] |
|
|
129.0 | [0..1] | [256..572] |
|
|
127.0 | [0..1] | [256..583] |
|
|
119.0 | [0..1] | [258..666] |
|
|
117.0 | [0..1] | [258..666] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MPPAHKRDTN VRNLSAPYNI PSQSARVAAG NAAINRRRSS PVENSPGNGF PVSEDATDYP 60
61 SGTTSENESL PLNRAPRSLR EVASELAQEE TLPVETSDLN ID
|
| Detection Method: |  |
| Confidence: | 8.522879 |
| Match: | 1z3iX |
| Description: | Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [103-269] |
1 11 21 31 41 51
| | | | | |
1 VESEVFDLED INFQNDADDI NQRFTYNNHP ASVENSLTNV NSIHAQPTTI SDMIDLTDET 60
61 SYDPRKQKFE QGKNPSTTNA EIEKEEPSKK QVVPSSQRLA DYKCVICLDS PENLSCTPCG 120
121 HIFCNFCILS ALGTTAATQK CPVCRRKVHP NKVICLEMML GSQKKKS
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 10.2497392096259 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 10.0460587929138 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.99384576623969 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 7.6988425139962 | bayes_pls_golite062009 |
| ligase activity | 3.92677358871643 | bayes_pls_golite062009 |
| binding | 2.78710909602478 | bayes_pls_golite062009 |
| transcription regulator activity | 1.93290256907934 | bayes_pls_golite062009 |
| nucleic acid binding | 1.65245433674494 | bayes_pls_golite062009 |
| NEDD8 ligase activity | 1.64302727579554 | bayes_pls_golite062009 |
| protein binding | 1.5975811408548 | bayes_pls_golite062009 |
| transcription repressor activity | 1.40546445536977 | bayes_pls_golite062009 |
| DNA binding | 1.36987440722489 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.2126425713931 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 1.03469202541773 | bayes_pls_golite062009 |
| transcription factor binding | 0.87358980288412 | bayes_pls_golite062009 |
| transcription factor activity | 0.679771179415046 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.50197530717959 | bayes_pls_golite062009 |
| SUMO polymer binding | 0.492200528146501 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 0.265769062717221 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
