| Protein: | SPAC12G12.16c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 496 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC12G12.16c.
| Description | E-value | Query Range |
Subject Range |
|
|
296.0 | [0..138] | [484..3] |
|
|
291.0 | [0..138] | [484..3] |
|
|
290.0 | [0..138] | [484..3] |
|
|
290.0 | [0..138] | [484..3] |
|
|
290.0 | [0..138] | [484..3] |
|
|
290.0 | [0..137] | [492..579] |
|
|
289.0 | [0..138] | [484..3] |
|
|
289.0 | [0..138] | [484..3] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MGVHGLLPII RKVASEGIRW LQPEFFSKYY PVLAVDGNLL LYRFFRSPNT PLHTNYQHVL 60
61 WALKLSRYCR KLKTSPIVVF DNLKPNDFKA EEHEKRSLIS SQIVNQRQVV QEQMYFLCNL 120
121 KNCLIDNNFP TGNFYYE
|
| Detection Method: |  |
| Confidence: | 3.35 |
| Match: | 1a76A |
| Description: | FLAP ENDONUCLEASE-1 FROM METHANOCOCCUS JANNASCHII |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| deoxyribonuclease activity | 2.73550697470983 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 2.71246687883519 | bayes_pls_golite062009 |
| flap endonuclease activity | 2.57978498366847 | bayes_pls_golite062009 |
| exonuclease activity | 2.5547866916853 | bayes_pls_golite062009 |
| 5'-3' exonuclease activity | 1.89867863692111 | bayes_pls_golite062009 |
| nuclease activity | 1.55313849436792 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 1.51267299365568 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 1.49423176639724 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.46099479323619 | bayes_pls_golite062009 |
| hydrolase activity | 1.35135691094584 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.29436272977333 | bayes_pls_golite062009 |
| catalytic activity | 1.27951740231695 | bayes_pls_golite062009 |
| 5'-3' exodeoxyribonuclease activity | 0.909711005599461 | bayes_pls_golite062009 |
| binding | 0.829502253184465 | bayes_pls_golite062009 |
| endonuclease activity | 0.819522430383345 | bayes_pls_golite062009 |
| double-stranded DNA specific exodeoxyribonuclease activity | 0.755216908246722 | bayes_pls_golite062009 |
| nucleic acid binding | 0.663928021509711 | bayes_pls_golite062009 |
| DNA binding | 0.607628194622979 | bayes_pls_golite062009 |
| 5'-flap endonuclease activity | 0.483195709033192 | bayes_pls_golite062009 |
| damaged DNA binding | 0.352293351244824 | bayes_pls_golite062009 |
| single-stranded DNA specific exodeoxyribonuclease activity | 0.250836277698583 | bayes_pls_golite062009 |
| protein binding | 0.235717056815183 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.195644127216695 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.0488381805790525 | bayes_pls_golite062009 |
|
Region A: Residues: [138-496] |
1 11 21 31 41 51
| | | | | |
1 IGPLLSQIGK LLFDLRSLNE RDNPFHAQNN AENLENATFV RLIVDKLNDR EKTLMIQEKK 60
61 NHLIHSLRQL LAFSEINDFP SEIRSYLEFI LSNLDLECLT LCLKIIKGIL TLDELQKAIK 120
121 LKQTELDKLE RRLYRPSPQN IFEIFEILKI LGIPASFSPI GVEAEAFASA ISQNNLAYAV 180
181 ATQDTDVLLL GSSMISNFLD LNDNFHLPLQ IMDPRKIAQE LNLTFDGFQD YCLMCGTDFT 240
241 SRIPKIGPVR ALKLIRYYGN AFDVLKALNV EEKYIIPTDY IKKFLTAKKL FTDLPSNNEL 300
301 FSFIHNIPKE FLHLSDSTYL DLEKQVLRIF NVQIEELDAK TPWYYHYELE KDVKSTYEY
|
| Detection Method: | |
| Confidence: | 75.0 |
| Match: | 1ul1X |
| Description: | Crystal structure of the human FEN1-PCNA complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| flap endonuclease activity | 3.33299970358696 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 3.29138075959109 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 3.25110450559975 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 2.0005433655378 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 1.9833086883205 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.91303769651266 | bayes_pls_golite062009 |
| 5'-3' exodeoxyribonuclease activity | 1.57727010389968 | bayes_pls_golite062009 |
| double-stranded DNA specific exodeoxyribonuclease activity | 1.37762008199118 | bayes_pls_golite062009 |
| endonuclease activity | 1.29708459961264 | bayes_pls_golite062009 |
| 5'-flap endonuclease activity | 1.1643154824625 | bayes_pls_golite062009 |
| exonuclease activity | 1.09514726884404 | bayes_pls_golite062009 |
| 5'-3' exonuclease activity | 0.933238209682018 | bayes_pls_golite062009 |
| binding | 0.835604503331911 | bayes_pls_golite062009 |
| single-stranded DNA specific exodeoxyribonuclease activity | 0.793329973341495 | bayes_pls_golite062009 |
| nucleic acid binding | 0.745035954521053 | bayes_pls_golite062009 |
| DNA binding | 0.712460398759799 | bayes_pls_golite062009 |
| damaged DNA binding | 0.632303740950726 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.620251812982006 | bayes_pls_golite062009 |
| catalytic activity | 0.60409960326459 | bayes_pls_golite062009 |
| single-stranded DNA specific 5'-3' exodeoxyribonuclease activity | 0.547465794501352 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.325190032018196 | bayes_pls_golite062009 |
| protein binding | 0.236485289446406 | bayes_pls_golite062009 |
| hydrolase activity | 0.0396334299858469 | bayes_pls_golite062009 |
