| Protein: | sfc2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 374 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sfc2.
| Description | E-value | Query Range |
Subject Range |
|
|
493.0 | [0..3] | [373..2528] |
|
|
424.0 | [0..3] | [373..216] |
|
|
421.0 | [0..4] | [373..312] |
|
|
420.0 | [0..3] | [373..209] |
|
|
414.0 | [0..3] | [373..158] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MCHFNELSIE IESKNLRSAK KIFHCPYEEC GKKYSRPSLL EQHLRTHSNE RPFVCDYTGC 60
61 SKAFYRKSHL KIHKRCHTNV KPFSCHYDGC DAQFYTQQHL ERHIEVHRKP KPYACTWEGC 120
121 DECFSKHQQL RSHISACHTH LLPYPCTYQD CELRFATKQK LQNHVNRAHE KIISYSCPHE 180
181 SCV
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| transcription repressor activity | 3.27542149084008 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| transcription activator activity | 2.19952417915035 | bayes_pls_golite062009 |
| chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.42975942698743 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.34049786451995 | bayes_pls_golite062009 |
| protein binding | 1.00484935878505 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.912796194488319 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.240825841910931 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.0129353639725593 | bayes_pls_golite062009 |
|
Region A: Residues: [184-374] |
1 11 21 31 41 51
| | | | | |
1 GHEGFEKWSQ LQNHIREAHV PSCSICGRQF KTAAHLRHHV VLHQTTLEER KTYHCPMEGC 60
61 KKSFTRSSAL KKHISVIHEG NMAFHCDSCG TKFGYKHMLQ RHLERGTCKK AHKPYINECG 120
121 IKHDGIEGVA IHDQKEKELS SNLVSDVAKK IINEVTGHGY KEAREYSCSF PECNYRFKRL 180
181 YDMHRHLNSH H
|
| Detection Method: | |
| Confidence: | 40.39794 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
