| Protein: | spt3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 307 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spt3.
| Description | E-value | Query Range |
Subject Range |
|
|
435.0 | [0..1] | [307..1] |
|
|
384.0 | [0..4] | [307..3] |
|
|
383.0 | [0..7] | [307..4] |
|
|
375.0 | [0..5] | [306..6] |
|
|
374.0 | [0..1] | [307..1] |
|
|
372.0 | [0..3] | [306..2] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MTETGRTSKY RVEIQQMMFI LGEVQDPLPE TTQLVEELIR GQVMEMLIQA NELALRRGSR 60
61 SITVEDLFFL IRHDRAKVNR LKTYLSWKEV RKKAKEQDAN PADTKDLFEE VDSKTRSMNA 120
121 VAMPWEVKNM FTEPVPETEE FEEDNDTMEM AYATRQRLKM
|
| Detection Method: |  |
| Confidence: | 1.05 |
| Match: | 1jfiB |
| Description: | Negative cofactor 2, NC2, beta chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 6.26683920136262 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.93249134612505 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 5.93249134612505 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.49084162254966 | bayes_pls_golite062009 |
| DNA binding | 4.24660531286828 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.2172829451557 | bayes_pls_golite062009 |
| nucleic acid binding | 4.14026521609645 | bayes_pls_golite062009 |
| transcription regulator activity | 3.91807454227165 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.91533222675137 | bayes_pls_golite062009 |
| acyltransferase activity | 3.38996237245502 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.35419529667223 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.18312128320637 | bayes_pls_golite062009 |
| binding | 3.14832737946099 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.02428691626433 | bayes_pls_golite062009 |
| transcription factor activity | 2.39322722597434 | bayes_pls_golite062009 |
| transcription activator activity | 1.12739348005764 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.03060091158028 | bayes_pls_golite062009 |
| protein binding | 1.01897642648285 | bayes_pls_golite062009 |
| transcription factor binding | 1.01773884290535 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.976797801726735 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.840442755533537 | bayes_pls_golite062009 |
| transcription initiation factor activity | 0.718301463460921 | bayes_pls_golite062009 |
| transcription repressor activity | 0.621482805601238 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.450418553112188 | bayes_pls_golite062009 |
| histone binding | 0.184823910505751 | bayes_pls_golite062009 |
| transferase activity | 0.137803992484684 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0585868733603467 | bayes_pls_golite062009 |
|
Region A: Residues: [161-307] |
1 11 21 31 41 51
| | | | | |
1 ADERTKKMTR EEYVHWSECR QASFTYRKGK RFREWCGMSI LTDTRPDNDI VDILGFLTFE 60
61 IVATLTEEAL AVKDRMDRIQ NSSGSGGSHA AHHPKNCSLF DGLTEGRTPL QVSHVLEAFR 120
121 RLQIPDKTHT AMRSFHGGLV KSRVYLI
|
| Detection Method: | |
| Confidence: | 1.61 |
| Match: | 1bh8B |
| Description: | TAF(II)28 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 6.26683920136262 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.93249134612505 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 5.93249134612505 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.49084162254966 | bayes_pls_golite062009 |
| DNA binding | 4.24660531286828 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.2172829451557 | bayes_pls_golite062009 |
| nucleic acid binding | 4.14026521609645 | bayes_pls_golite062009 |
| transcription regulator activity | 3.91807454227165 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.91533222675137 | bayes_pls_golite062009 |
| acyltransferase activity | 3.38996237245502 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.35419529667223 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.18312128320637 | bayes_pls_golite062009 |
| binding | 3.14832737946099 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.02428691626433 | bayes_pls_golite062009 |
| transcription factor activity | 2.39322722597434 | bayes_pls_golite062009 |
| transcription activator activity | 1.12739348005764 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.03060091158028 | bayes_pls_golite062009 |
| protein binding | 1.01897642648285 | bayes_pls_golite062009 |
| transcription factor binding | 1.01773884290535 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.976797801726735 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.840442755533537 | bayes_pls_golite062009 |
| transcription initiation factor activity | 0.718301463460921 | bayes_pls_golite062009 |
| transcription repressor activity | 0.621482805601238 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.450418553112188 | bayes_pls_golite062009 |
| histone binding | 0.184823910505751 | bayes_pls_golite062009 |
| transferase activity | 0.137803992484684 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0585868733603467 | bayes_pls_golite062009 |
