| Protein: | rad2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 380 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rad2.
| Description | E-value | Query Range |
Subject Range |
|
|
388.0 | [0..1] | [380..1] |
|
|
388.0 | [0..1] | [380..1] |
|
|
387.0 | [0..1] | [380..1] |
|
|
385.0 | [0..1] | [380..1] |
|
|
381.0 | [0..1] | [380..1] |
|
Region A: Residues: [1-380] |
1 11 21 31 41 51
| | | | | |
1 MGIKGLAQVL SEHAPASVKH NDIKNYFGRK VAIDASMSLY QFLIQVRSQD GQQLMNEQGE 60
61 TTSHLMGMFY RTLRIVDNGI KPCFVFDGKP PTLKSGELAK RVARHQKARE DQEETKEVGT 120
121 AEMVDRFAKR TVKVTRQHND EAKRLLELMG IPFVNAPCEA EAQCAALARS GKVYAAASED 180
181 MDTLCFQAPV LLRHLTFSEQ RKEPISEYNI EKALNGLDMS VEQFVDLCIL LGCDYCEPIR 240
241 GVGPARAVEL IRQYGTLDRF VKEADRSKYP IPEDWPYEDA RRLFLDAEVL PGEEIELKWK 300
301 SPDADGIIQF LVKEKGFNED RVKLGINRLE KASKTIPQGR LDSFFKPVPS SPKKPVDTKS 360
361 KGSAKRKRDS NKGGESKKKR
|
| Detection Method: |  |
| Confidence: | 103.0 |
| Match: | 1ul1X |
| Description: | Crystal structure of the human FEN1-PCNA complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, acting on ester bonds | 5.44893156272125 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 4.17543266498933 | bayes_pls_golite062009 |
| DNA polymerase activity | 4.1412804577877 | bayes_pls_golite062009 |
| flap endonuclease activity | 4.10438637013244 | bayes_pls_golite062009 |
| exonuclease activity | 3.99717729574528 | bayes_pls_golite062009 |
| single-stranded DNA specific exodeoxyribonuclease activity | 3.90367500308359 | bayes_pls_golite062009 |
| endonuclease activity | 3.40075034200919 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 3.29138075959109 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 3.25110450559975 | bayes_pls_golite062009 |
| 5'-3' exonuclease activity | 3.19536858640519 | bayes_pls_golite062009 |
| nuclease activity | 2.9643999717473 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 2.76402807313057 | bayes_pls_golite062009 |
| single-stranded DNA specific endodeoxyribonuclease activity | 2.49388502336873 | bayes_pls_golite062009 |
| hydrolase activity | 2.4418166499042 | bayes_pls_golite062009 |
| ribonuclease activity | 2.33034300966639 | bayes_pls_golite062009 |
| 5'-3' exodeoxyribonuclease activity | 2.26658239783943 | bayes_pls_golite062009 |
| damaged DNA binding | 2.10834170214137 | bayes_pls_golite062009 |
| double-stranded DNA specific exodeoxyribonuclease activity | 2.09057967200253 | bayes_pls_golite062009 |
| binding | 2.06833406478856 | bayes_pls_golite062009 |
| nucleic acid binding | 2.02510018436829 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 2.0005433655378 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 1.9833086883205 | bayes_pls_golite062009 |
| DNA binding | 1.93844174573408 | bayes_pls_golite062009 |
| 5'-flap endonuclease activity | 1.81850767854435 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.70042864382698 | bayes_pls_golite062009 |
| catalytic activity | 1.37534898662234 | bayes_pls_golite062009 |
| ribonuclease H activity | 1.29762010718359 | bayes_pls_golite062009 |
| single-stranded DNA specific 5'-3' exodeoxyribonuclease activity | 1.15948049342759 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.901965019685213 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.626785110524684 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.512509234493511 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.50487165366129 | bayes_pls_golite062009 |
| protein binding | 0.488846604207788 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.351084053450465 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.319622686426271 | bayes_pls_golite062009 |
| endoribonuclease activity | 0.312346277055223 | bayes_pls_golite062009 |
| single-stranded DNA specific 3'-5' exodeoxyribonuclease activity | 0.14861832363159 | bayes_pls_golite062009 |
| 3'-5'-exodeoxyribonuclease activity | 0.0205129272358 | bayes_pls_golite062009 |
