| Protein: | nup124 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1159 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nup124.
| Description | E-value | Query Range |
Subject Range |
|
|
426.0 | [0..3] | [1158..418] |
|
|
398.0 | [0..3] | [1155..947] |
|
|
368.0 | [0..116] | [1152..56] |
|
|
368.0 | [0..6] | [1154..1404] |
|
|
347.0 | [0..7] | [1156..5207] |
|
|
345.0 | [0..12] | [1092..502] |
|
Region A: Residues: [1-422] |
1 11 21 31 41 51
| | | | | |
1 MPPVSKNTRT SSKTVKKPYD PPQGSSRPFF TVLKRAFSSV LHPFTSGLDE KASGTASKDR 60
61 KSGRAGTKSL LTPELTPHYL GKSPRIIRVS NRSHVRTIDG IEEKVHTNTF EPRKPKQKQD 120
121 YTNSPTLFKR HDELSLKSLN SLHPSSALSK KLGSTSQHQI ATPKSSASLL NILRSLHDEQ 180
181 KNTLNISSVK QDRITEANPT CEKRKPSRSP SPMLSKKKSV ARASENEPSA KQNKSFSGND 240
241 SHKSLTDIRD KENGETEVSA KNHVPHRSSR RRRRHQRLIP IIYETLEQMD LRKPVLVNAE 300
301 VQTDSNPGNT MFIDKQDIYH RLSTPTSRKR QTLEKGHIKA FSAVDEDLDE IFACEDDVHY 360
361 TALPKQNPKS ERILEPIIAS PKDNTSDKGL LTKSAPTFEE LQASITPKPV KTSPNDTALT 420
421 LA
|
| Detection Method: |  |
| Confidence: | 1.03 |
| Match: | 1omwA |
| Description: | G-protein coupled receptor kinase 2, N-terminal domain; G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1); G-protein coupled receptor kinase 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.22428758317736 | bayes_pls_golite062009 |
| protein binding | 1.54961752900242 | bayes_pls_golite062009 |
| protein kinase activity | 1.31419329313343 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.20088944410496 | bayes_pls_golite062009 |
| transporter activity | 1.14487771276691 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.06759196344598 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.04308738565528 | bayes_pls_golite062009 |
| receptor activity | 1.02162548955804 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.994293779520251 | bayes_pls_golite062009 |
| kinase activity | 0.989702565083208 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.833831720654728 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.724052049967156 | bayes_pls_golite062009 |
| Ran GTPase binding | 0.709291241748316 | bayes_pls_golite062009 |
| molecular transducer activity | 0.695021063527918 | bayes_pls_golite062009 |
| signal transducer activity | 0.695021063527918 | bayes_pls_golite062009 |
| transferase activity | 0.624121946809127 | bayes_pls_golite062009 |
| catalytic activity | 0.593995061424214 | bayes_pls_golite062009 |
| ATP binding | 0.572345879629496 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.566982635339813 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.541384252517142 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.534108415835127 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.521108494674166 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.521107326648506 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.521095364461424 | bayes_pls_golite062009 |
| nucleotide binding | 0.515729013116388 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.468575645137665 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 0.415062676534168 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.16568361458757 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.0997896740350728 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0229080352184639 | bayes_pls_golite062009 |
|
Region A: Residues: [423-511] |
1 11 21 31 41 51
| | | | | |
1 NAEDNKTFEH QPLSKDTEAP KSQFSSSPTK ESTTRKSEVE PPSPSKEIKS SHFSVPEFKF 60
61 EPKTEATTDK KLNVPKFEFK PTATADVQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [512-635] |
1 11 21 31 41 51
| | | | | |
1 NRLKENEPKP TFFAQLPSKT QETPSITENK PSFFSQLSPK REETEKKDNA PSAPASTSGF 60
61 SFGGFAPKTL EEKEETKAPT FNFSLNNASS TQDTTKPTLQ FNFGSSFGKP TSNIFNDKKT 120
121 SENG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [636-768] |
1 11 21 31 41 51
| | | | | |
1 LASSTVASES KPSAPESKPS SGFGNTAGSS PFSFNLTKES KEVPPTNSFS FAKKGKDEAN 60
61 DSLSAKASTP FSFAKPNTEN VTTTAPQFSF NFTKPNTDAK TNLLPEKTFN EEAVKQKETE 120
121 KEVPPTGPKA SEI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [769-1002] |
1 11 21 31 41 51
| | | | | |
1 KDSVSSNNAV PSSTFNFVSP FAAVSEKTNE NNIPNDTTKT NGNATKRTLE QTEDAKPFAF 60
61 SFGSTTEQAN KKASTSNETT KPQLDTSSKT DGVTANAPFS FASAFNAPKP STNTADGKDS 120
121 ASNLTTPSPA FSFGNNSGVK ASSNNNPSTN SSTAPFSFGT SNKPAFSFGS ATSKTTSEGT 180
181 APAASASAPA PTTSAFSFGA SNSSMNKEEN TPMAKDAGDT APASGFKSGF SFGA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1003-1159] |
1 11 21 31 41 51
| | | | | |
1 NNSPQPASMF GTSTPAPSSA FAFGNQSGTN PAAPAGFGGI TNTATNNPPS TGFTFTPSNA 60
61 GSTAAPMFGA GNTPNPSGSI NNASQAFAFG SGEPSNPASN PPSTGFSFGA ATPSAFNASA 120
121 SQSPAPNGIQ FNLGSSNSQT NAPPGRKIAV PRSRRKR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
