| Protein: | int6 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 501 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for int6.
| Description | E-value | Query Range |
Subject Range |
|
|
689.0 | [0..13] | [495..1] |
|
|
689.0 | [0..13] | [495..2] |
|
|
688.0 | [0..13] | [495..2] |
|
|
688.0 | [0..13] | [495..2] |
|
|
687.0 | [0..13] | [495..2] |
|
|
685.0 | [0..13] | [495..2] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MGSELKSTSP LAVKYDLSQK IMQHLDRHLI FPLLEFLSLR QTHDPKELLQ AKYDLLKDTN 60
61 MTDYVANLWT NLHGGHTDED MANAFAEKRR SVLQELSELE EEVQGILGVL ENPDLIAALR 120
121 QDKGQNLQHL QEHYNITPER IAVLYKFAQ
|
| Detection Method: |  |
| Confidence: | 80.958607 |
| Match: | PF09440.1 |
| Description: | No description for PF09440.1 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [150-282] |
1 11 21 31 41 51
| | | | | |
1 FQYNCGNYGG ASDLLYHFRA FSKDPELNAS ATWGKFASEI LTVDWDGAME ELGKLREMVD 60
61 SKSFKDSAVQ LRNRTWLLHW SLFPLFNHAN GCDTLCDLFF YTPYLNTIQT SCPWLLRYLT 120
121 VAVVTNQNNA NQK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [283-360] |
1 11 21 31 41 51
| | | | | |
1 PRNPRQSYQR RMRDLVRIIS QENYEYSDPV TSFISALYTE VDFEKAQHCL RECEEVLKTD 60
61 FFLVSLCDHF LEGARKLL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [361-501] |
1 11 21 31 41 51
| | | | | |
1 AEAYCRIHSV ISVDVLANKL EMDSAQLIQL VENRNNPSVA AASNVAADQS TEDESIESTS 60
61 TNVVADDLIT EAETATEAEE PEPEVQFGFK AKLDGESIII EHPTYSAFQQ IIDRTKSLSF 120
121 ESQNLEQSLA KSISELKHAT V
|
| Detection Method: | |
| Confidence: | 3.17 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.40627040093952 | bayes_pls_golite062009 |
| DNA binding | 3.18517869180019 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.974370828939 | bayes_pls_golite062009 |
| nucleic acid binding | 2.8293727459515 | bayes_pls_golite062009 |
| binding | 2.73671056234733 | bayes_pls_golite062009 |
| structural molecule activity | 2.72616711594099 | bayes_pls_golite062009 |
| transcription factor activity | 2.51227631362049 | bayes_pls_golite062009 |
| transcription activator activity | 2.04243540203739 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.96901349910727 | bayes_pls_golite062009 |
| protein binding | 1.77689943618029 | bayes_pls_golite062009 |
| transcription repressor activity | 0.811726311475138 | bayes_pls_golite062009 |
| RNA binding | 0.352569950847387 | bayes_pls_golite062009 |
| hydrolase activity | 0.20695163916851 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.142921675412538 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.124542865343065 | bayes_pls_golite062009 |
