| Protein: | FBpp0309478, Ran... |
| Organism: | Drosophila melanogaster |
| Length: | 1241 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309478, Ran....
| Description | E-value | Query Range |
Subject Range |
|
|
858.0 | [0..1] | [1239..51] |
|
Region A: Residues: [1-811] |
1 11 21 31 41 51
| | | | | |
1 MSQHGGTEAL AAELASAIDL VMNPMTQQQA RLEAYMACER FKEESPMCAQ VGLFLASSPQ 60
61 SNQQVRHFGL QLIEYTIKYR WNCITHEEKV YIKDNAIKML NVGVGPAEDR SLLPTKDALS 120
121 RIIVEMIKRE WPQQWSDLLP ELSQACTKGE AQTELVLLVF LRLVEDVALL QTIESNQRRK 180
181 DMYQALNNNM NDIFEFFLRL VEQHVTAFRE TTRLCNYTKA NAHSRVVEMV LLTLSGFVEW 240
241 VSIQHIMSSN GKLMHFLCIL LNDKAFQCNA AECLAQITNR KGQTKERKPL LQLFNEEPLR 300
301 YIYQASQIPA DTSSTLAVEQ HLNFLKKLLQ VLNGMAQQLV ALWGKDDATQ RPVHLEVLLE 360
361 CLLLLVQHPS LGLSHGSALI WQLLLKHEPS SKDFAMVNYI PKLIHTIAPR IVKLPYPASA 420
421 SSPASLSTEA YIRLEHDSEE EYALYFFRCR TDFLEIFRLA TLVQPLVTYG YCEQWLQQRL 480
481 RNAQIEADAE VKSGNVSCSV LDPVYLEWDA LVSVLDGVLS RILLVAERPS VPAGLRLLEE 540
541 CLKLETINPL TYSILLSCIS ALFVFLSMSA CQITATNCVA MSGVSLLPRV LDKIFRALVM 600
601 KPPNELEKVQ AKSAKNLRRH AASLLVKLAH KYPLLLLPVF EQINGHVELL LKEPGKHQLC 660
661 RLMRTTLQEA LILISNHFCD FERQTLFIEH IVQDKRTEWL AFGDALKSPL DFMSFVGLDK 720
721 PPIFAVEGAV TLQNRSRLLD ALHVVLGVVK RCTWPDDPER AQRGGFVIGC TELGNPICRN 780
781 PATKHIVPLL SHVLSLMRVL NELFAPEALQ A
|
| Detection Method: |  |
| Confidence: | 77.69897 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 3.48172991171337 | bayes_pls_golite062009 |
| binding | 2.91891696274037 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| protein binding | 1.94427330399472 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| RNA binding | 1.90646441530563 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| importin-alpha export receptor activity | 0.259676026705859 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| nucleic acid binding | 0.169755106399802 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
| mRNA binding | 0.0364755031177104 | bayes_pls_golite062009 |
|
Region A: Residues: [812-964] |
1 11 21 31 41 51
| | | | | |
1 LSEGYRGIHG MMEHEKKLLM GICALPTDPL DTTIRSEPTA FEKMQTFMMM VTEGCYHLMG 60
61 SAGPSLGRDL YQLMGLSDAI VTNVFSRMDL VPDYRLRPII RVFFKPFVYS CPPSFYDSVL 120
121 VPLFAHLAPL MCERLTRRWI YIASLYESGQ LDG
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1w9cA |
| Description: | Proteolytic fragment of CRM1 spanning six C-terminal HEAT repeats |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [965-1034] |
1 11 21 31 41 51
| | | | | |
1 EVNDTQEVLE DQLNRTLTRE YLDVLKIALV GGQIGADHVA AGANANSNSV AMENEEHSMD 60
61 SAPQSRAIQS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1035-1241] |
1 11 21 31 41 51
| | | | | |
1 ALLSDIISDL GGKLLRNGLI GNYVLMTLLK AIAWNDGMCS MKAVNIAAPV MRFLAAEKLM 60
61 DENKAVTAFT AVLQGMQVHG QHEANQSGLV TLGVQFYELL RPQFPILSEV LQHIPSVNAA 120
121 DIQKFDEKIA VAPVKGNKVD RAKKDIFKKL TAQLVGRSVN QLFRHEVQIA NLPPMQSHKA 180
181 KGSMGTTADI MDSNQNASLA RLFGPEK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
