| Protein: | NetB-PD, NetB-PC... |
| Organism: | Drosophila melanogaster |
| Length: | 793 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NetB-PD, NetB-PC....
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..25] | [761..31] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MVRATGTRMG LLLPIILALA IGSSAAGISS NDPCYFEGKP RKCLPSFVNA AYGNPVQASS 60
61 VCGAQQPERY CELLRDGNAG ECRSCEQQRY GPAALTDLNN PSNVTCWRSG AVNVPHDPDS 120
121 APPDNVTLTL SLGKKYELTY ISLSFCPRSP RPDSLAIFKS SDFGQTWQPF QFYSSQCQKF 180
181 Y
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [182-250] |
1 11 21 31 41 51
| | | | | |
1 GRPDRAKISK FNEQEARCIN SQHDTGGAAQ RFAFNTLEGR PSANDLDSSL VLQDWVTATD 60
61 IRVVFHRLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [251-445] |
1 11 21 31 41 51
| | | | | |
1 LPPQLLKVKN ANAFSDEMGG SREEDEDDDA DLELDGEQDE YDYNLQDNDS ADAGYDEYEE 60
61 PKKHLELDDD HLHLDYASDG ESVVKRQGKH KGSAYEKHYQ SKLAATTPPQ QPPKVTPPGK 120
121 VTPPSTAAPS AAASAVTLPI SQHYAVSDFA VGGRCKCNGH ASECVATVSS GSGTALSDQD 180
181 DGQDEDTPSA PSLAN
|
| Detection Method: | |
| Confidence: | 2.06 |
| Match: | 1npeB |
| Description: | Crystal structure of Nidogen/Laminin Complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [446-607] |
1 11 21 31 41 51
| | | | | |
1 HFGRSTQMSA KLTMTCACKH NTAGPECERC KPFYFDRPWG RATDNDANEC KMCQCNGHAR 60
61 RCRFNLELYK LSGRVSGGVC YNCQHDTTGR YCHYCREGYY RDATKPPNHR KVCKRCDCHP 120
121 VGSTGKTCNH LSGQCPCKEG VTGLTCNRCA RGYQQTRSHV AP
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1npeB |
| Description: | Crystal structure of Nidogen/Laminin Complex |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [608-793] |
1 11 21 31 41 51
| | | | | |
1 CIKVPTNANM IQAESAGGGG GGGTGDYKDG GGSQVEEMKK YCGKCKASPK KLNLNKFCME 60
61 DYAILAKVIG HDRASQDIST EKFSIERQNE IYKYEINIQT IFKRNPMSGT TSSLLGRGNM 120
121 MLLVPRKSIE CQCPKIKLNK SYLILGRDSE AAPGYLAIGP SSVVLEWKDE WSLRMKRFQR 180
181 RARKCS
|
| Detection Method: | |
| Confidence: | 4.66 |
| Match: | 1uapA |
| Description: | Procollagen c-proteinase enhancer protein PCOLCE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| metalloendopeptidase inhibitor activity | 2.93008814424574 | bayes_pls_golite062009 |
| metalloenzyme regulator activity | 2.93008814424574 | bayes_pls_golite062009 |
| metalloenzyme inhibitor activity | 2.93008814424574 | bayes_pls_golite062009 |
| cytokine activity | 2.1026057983858 | bayes_pls_golite062009 |
| protein binding | 1.99085018021326 | bayes_pls_golite062009 |
| chemokine activity | 1.91192407750516 | bayes_pls_golite062009 |
| chemokine receptor binding | 1.91192407750516 | bayes_pls_golite062009 |
| receptor binding | 1.70988428101653 | bayes_pls_golite062009 |
| binding | 1.55301582466033 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 1.33224850209979 | bayes_pls_golite062009 |
| endopeptidase inhibitor activity | 1.31068274422963 | bayes_pls_golite062009 |
| peptidase inhibitor activity | 1.26079752095237 | bayes_pls_golite062009 |
| enzyme inhibitor activity | 1.2236133281236 | bayes_pls_golite062009 |
| integrin binding | 0.387338090721027 | bayes_pls_golite062009 |
