| Protein: | l(1)G0007-PB |
| Organism: | Drosophila melanogaster |
| Length: | 534 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(1)G0007-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
478.0 | [0..1] | [534..689] |
|
Region A: Residues: [1-371] |
1 11 21 31 41 51
| | | | | |
1 MDSSKFATFF GNVPTFTIPG RTFPVDVMFS KNTCEDYVES AVKQALQVHL TPNEGDMLIF 60
61 MPGQEDIEVT CEVLEERLAE IDNAPALSIL PIYSQLPSDL QAKIFQKSSD GLRKCVVATN 120
121 IAETSLTVDG IIYVIDSGYC KLKVYNPRIG MDALQIYPIS QANANQRSGR AGRTGPGQAY 180
181 RLYTQRQYKD ELLALTVPEI QRTNLANTVL LLKSLGVVDL LQFHFMDPPP QDNILNSLYQ 240
241 LWILGALDHT GALTTLGRQM AEFPLDPPQC QMLIVACRMG CSAEVLIIVS MLSVPSIFYR 300
301 PKGREDEADG VREKFQRPES DHLTYLNVYQ QWRQNNYSST WCNEHFIHIK AMRKVREVRQ 360
361 QLKDIMTQQN L
|
| Detection Method: |  |
| Confidence: | 13.522879 |
| Match: | 1oywA |
| Description: | Structure of the RecQ Catalytic Core |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 4.704140727858 | bayes_pls_golite062009 | |
| RNA binding | 2.29590582680214 | bayes_pls_golite062009 |
| binding | 2.05253348982328 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.57653963868443 | bayes_pls_golite062009 |
| RNA helicase activity | 1.42791449104435 | bayes_pls_golite062009 |
| nucleic acid binding | 1.41477043612798 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.39335733374328 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.36724390116598 | bayes_pls_golite062009 |
| DNA binding | 1.11699929651302 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| transcription regulator activity | 0.989226939888218 | bayes_pls_golite062009 |
| hydrolase activity | 0.770112659770838 | bayes_pls_golite062009 |
| mRNA binding | 0.76699944561918 | bayes_pls_golite062009 |
| helicase activity | 0.6191010101321 | bayes_pls_golite062009 |
| structural molecule activity | 0.596382945962261 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.461763181659193 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.458831409927227 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.455976987338331 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.422944846459286 | bayes_pls_golite062009 |
| snRNA binding | 0.418985924846052 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.29664013896754 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.29664013896754 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| transcription factor activity | 0.0434163635422169 | bayes_pls_golite062009 |
|
Region A: Residues: [372-534] |
1 11 21 31 41 51
| | | | | |
1 SVISCGIDWD IVRKCICSAY FYQAARLKGI GEYVNLRTGM PCHLHPTSAL YGLGTTPDYV 60
61 VYHELIMTAK EYMQCATAVD GYWLAELGPM FFSVKESGRS GREKKKQAAE HLKEMEEQML 120
121 KAQHEMEERK QQAAEREEQL ATKQEIATPG NATPRRTPAR IGL
|
| Detection Method: | |
| Confidence: | 20.619789 |
| Match: | PF07717.7 |
| Description: | No description for PF07717.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
