| Protein: | FBpp0312045, Ork... |
| Organism: | Drosophila melanogaster |
| Length: | 1001 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0312045, Ork....
| Description | E-value | Query Range |
Subject Range |
|
|
589.0 | [0..1] | [1001..1] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MSPNRWILLL IFYISYLMFG AAIYYHIEHG EEKISRAEQR KAQIAINEYL LEELGDKNTT 60
61 TQDEILQRIS DYCDKPVTLP PTYDDTPYTW TFYHAFFFAF TVCSTVGYGN ISPTTFAGRM 120
121 IMIAYSVIGI PVNGILFAGL GEYFGRTFEA IYRRYKKYKM STDMHYVPPQ LGL
|
| Detection Method: |  |
| Confidence: | 24.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [174-431] |
1 11 21 31 41 51
| | | | | |
1 ITTVVIALIP GIALFLLLPS WVFTYFENWP YSISLYYSYV TTTTIGFGDY VPTFGANQPK 60
61 EFGGWFVVYQ IFVIVWFIFS LGYLVMIMTF ITRGLQSKKL AYLEQQLSSN LKATQNRIWS 120
121 GVTKDVGYLR RMLNELYILK VKPVYTDVDI AYTLPRSNSC PDLSMYRVEP APIPSRKRAF 180
181 SVCADMVAAQ REAGMVHANS DTELSKLDRE KTFETAEAYR QTTDLLAKVV NALATVKPPP 240
241 AEQEDAALYG GYHGFSDS
|
| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | 1lnqA |
| Description: | Potassium channel-related protein MthK |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| inward rectifier potassium channel activity | 5.0997110076666 | bayes_pls_golite062009 |
| potassium channel activity | 3.07560078542081 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.98602674522518 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 2.96809690970616 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 2.89215814786806 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.73807350248822 | bayes_pls_golite062009 |
| ligand-gated channel activity | 2.72051922059922 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 2.72051922059922 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.67515190518646 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 2.42997534485101 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 2.36555310840994 | bayes_pls_golite062009 |
| voltage-gated channel activity | 2.35294722733296 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.33083670641501 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.13014428099026 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 1.91774061209278 | bayes_pls_golite062009 |
| potassium ion transmembrane transporter activity | 1.57069429249737 | bayes_pls_golite062009 |
| cation channel activity | 1.43917477594689 | bayes_pls_golite062009 |
| channel activity | 1.01956231306507 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.01956231306507 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.994513387627819 | bayes_pls_golite062009 |
| ion channel activity | 0.990830355816173 | bayes_pls_golite062009 |
| gated channel activity | 0.800384460449848 | bayes_pls_golite062009 |
| transporter activity | 0.793769336118517 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.635891484075352 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.555188550031886 | bayes_pls_golite062009 |
| signal transducer activity | 0.293137523663314 | bayes_pls_golite062009 |
| molecular transducer activity | 0.293137523663314 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.239024094835991 | bayes_pls_golite062009 |
| binding | 0.144628283348863 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.135469305070471 | bayes_pls_golite062009 |
| receptor activity | 0.113048653187164 | bayes_pls_golite062009 |
|
Region A: Residues: [432-601] |
1 11 21 31 41 51
| | | | | |
1 QILASEWSFS TVNEFTSPRR PRARACSDFN LEAPRWQSER PLRSSHNEWT WSGDNQQIQE 60
61 AFNQRYKGQQ RANGAANSTM VHLEPDALEE QLKKQSPGAG RVKKFSMPDG LRRLFPFQKK 120
121 RPSQDLERKL SVVSVPEGVI SQQARSPLDY YSNTVTAASS QSYLRNGRGP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [602-788] |
1 11 21 31 41 51
| | | | | |
1 PPPFESNGSL ASGGGGLTNM GFQMEDGATP PSALGGGAYQ RKAAAGKRRR ESIYTQNQAP 60
61 SARRGSMYPP TAHALAQMQM RRGSLATSGS GSAAMAAVAA RRGSLFPATA SASSLTSAPR 120
121 RSSIFSVTSE KDMNVLEQTT IADLIRALEV VHTHAVLDEQ QQAAAAGGAA GGGGISRGSR 180
181 KQRKMGN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [789-1001] |
1 11 21 31 41 51
| | | | | |
1 AGLEPPQLPP ILSLFAGDQT RTLQAAAANR LYARRSTIVG ISPTGGAATA PAARSLLEPP 60
61 PSYTERAANQ SQITAGPSNA PTVQSKFRRR FSVRPTALQI PPGQAPPPGA SLMEQSSQTA 120
121 LQRRLSLRPS PLARELSPTS PPGGSGSALP AGAIDESGGT SAQRLLPLPA GTRPSTSSTH 180
181 SPLSRIVQIS QAQRKSSMPS AAATGSSGAP AEK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
