| Protein: | rap-PB, rap-PA |
| Organism: | Drosophila melanogaster |
| Length: | 478 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rap-PB, rap-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
539.0 | [0..3] | [475..1188] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MFSPEYEKRI LKHYSPVARN LFNNFESSTT PTSLDRFIPC RAYNNWQTNF ASINKSNDNS 60
61 PQTSKKQRDC GETARDSLAY SCLLKNELLG SAIDDVKTAG EERNENAYTP AA
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 2ojhA |
| Description: | No description for 2ojhA was found. |
|
Region A: Residues: [113-478] |
1 11 21 31 41 51
| | | | | |
1 KRSLFKYQSP TKQDYNGECP YSLSPVSAKS QKLLRSPRKA TRKISRIPFK VLDAPELQDD 60
61 FYLNLVDWSS QNVLAVGLGS CVYLWSACTS QVTRLCDLSP DANTVTSVSW NERGNTVAVG 120
121 THHGYVTVWD VAANKQINKL NGHSARVGAL AWNSDILSSG SRDRWIIQRD TRTPQLQSER 180
181 RLAGHRQEVC GLKWSPDNQY LASGGNDNRL YVWNQHSVNP VQSYTEHMAA VKAIAWSPHH 240
241 HGLLASGGGT ADRCIRFWNT LTGQPMQCVD TGSQVCNLAW SKHSSELVST HGYSQNQILV 300
301 WKYPSLTQVA KLTGHSYRVL YLALSPDGEA IVTGAGDETL RFWNVFSKAR SQKENKSVLN 360
361 LFANIR
|
| Detection Method: | |
| Confidence: | 77.154902 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 7.6976390971701 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 7.38724968585043 | bayes_pls_golite062009 |
| 6.67009948605948 | bayes_pls_golite062009 | |
| acid-amino acid ligase activity | 6.41826641115519 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 5.36089569430187 | bayes_pls_golite062009 |
| RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
| GTPase activity | 3.20623818975951 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| transcription repressor activity | 2.29049708962212 | bayes_pls_golite062009 |
| actin binding | 2.27900251096697 | bayes_pls_golite062009 |
| snoRNA binding | 2.27164613239345 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| ligase activity | 1.82531515493699 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| structural molecule activity | 1.47097979074281 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.41752877005447 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| type 1 angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| transporter activity | 0.807925044108643 | bayes_pls_golite062009 |
| dynactin binding | 0.71086831563355 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 0.700626674902544 | bayes_pls_golite062009 |
| actin filament binding | 0.554537899540618 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.426429095658617 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.414491774707324 | bayes_pls_golite062009 |
| kinase activity | 0.387572734234845 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.226335610368636 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.116261617458825 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
