| Protein: | ac-PA |
| Organism: | Drosophila melanogaster |
| Length: | 201 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ac-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
175.0 | [0..1] | [201..1] |
|
|
171.0 | [0..1] | [201..1] |
|
|
169.0 | [0..1] | [201..1] |
|
|
139.0 | [0..20] | [201..24] |
|
|
131.0 | [0..18] | [199..93] |
|
|
127.0 | [0..4] | [187..68] |
|
|
124.0 | [0..4] | [187..40] |
|
|
123.0 | [0..4] | [187..74] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MALGSENHSV FNDDEESSSA FNGPSVIRRN ARERNRVKQV NNGFSQLRQH IPAAVIADLS 60
61 NGRRGIGPGA NKKLSKVSTL KMAVEYIRRL QKVLHENDQQ KQKQLHLQQQ HLHFQQQQQH 120
121
|
| Detection Method: |  |
| Confidence: | 10.0 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| transcription activator activity | 3.87875547821718 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.42035985454056 | bayes_pls_golite062009 |
| protein binding | 2.64975291677725 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.48787404513864 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.44519817693888 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| transcription repressor activity | 0.955588849035129 | bayes_pls_golite062009 |
| promoter binding | 0.94414084000081 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.801830750183111 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.53175615551166 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.3513586903977 | bayes_pls_golite062009 |
| protein dimerization activity | 0.20674648626116 | bayes_pls_golite062009 |
|
Region A: Residues: [121-201] |
1 11 21 31 41 51
| | | | | |
1 QHLYAWHQEL QLQSPTGSTS SCNSISSYCK PATSTIPGAT PPNNFHTKLE ASFEDYRNNS 60
61 CSSGTEDEDI LDYISLWQDD L
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
