| Protein: | pnt-PB |
| Organism: | Drosophila melanogaster |
| Length: | 718 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pnt-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
544.0 | [0..1] | [718..1] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MELAICKTDL SATKFMLPPA LPSSAAIGSS SAVASTASHF LDKAAHELFQ LNAINGHLFK 60
61 SPASSHLNSV GSPSILSQLN GIGNSGNHSG QVSTMRLKKN RKVTFLSSLV ESKNIFIKEE 120
121 PIHGCKDLCS LSDISDHEAS LE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [143-250] |
1 11 21 31 41 51
| | | | | |
1 VPTALPPLTP GTNRKVNEVL KASFASWEKE VQKCNITKDP REWTEEHVIY WLNWAKNEFS 60
61 LVSMNLDPFY KMKGRAMVDL GKEKFLAITP PFTGDILWEH LDILQKDC
|
| Detection Method: | |
| Confidence: | 39.522879 |
| Match: | 2jv3A |
| Description: | No description for 2jv3A was found. |
|
Region A: Residues: [251-331] |
1 11 21 31 41 51
| | | | | |
1 EKPNEDIVHG NSFESATTAS VCGSDHQVAN YPNETHANSN NSSINSRLSM DYVTSAGNSD 60
61 NKNFHRATPH SHNGYNTSNT H
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [332-550] |
1 11 21 31 41 51
| | | | | |
1 DRINNSTPPQ QQQSQQPTVN GSGSASSNNN NSMLPPAVQQ SNNENNNTSS SNTNNSSNNN 60
61 NNSGGSNNSN AGSNNNNNNN NNINFMAAAA IFQHHLKEEP GTQNGNIGGY GGGSNSQNDP 120
121 TDLSSYGLPA HLAAYGGGSG SGPTGGRSSG GGGDESDYHS TISAQDHQSQ QSSGGNGSGG 180
181 ASGGSTGNSN GYLDSSSEFY GSYAGRNRFH DGYPPEFTP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [551-718] |
1 11 21 31 41 51
| | | | | |
1 YDAQSFQSMG PQPTAMDQWG AAHAHQHPAA YMSTLGLDKG LLGGYTTQGG VPCFTGSGPI 60
61 QLWQFLLELL LDKTCQSFIS WTGDGWEFKL TDPDEVARRW GIRKNKPKMN YEKLSRGLRY 120
121 YYDKNIIHKT AGKRYVYRFV CDLQNLVGHT PEELVAKYDL KIEKKDVD
|
| Detection Method: | |
| Confidence: | 46.30103 |
| Match: | 1mdmB |
| Description: | ETS-1 transcription factor, residues 331-440 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
| nucleic acid binding | 4.69183445184264 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.48053910222825 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| transcription repressor activity | 2.22485867684613 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
