YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG6974-PA
Organism: Drosophila melanogaster
Length: 251 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6974-PA.

Description E-value Query
Range
Subject
Range
gi|54638082, gi|... - gi|54638082|gb|EAL27484.1| GA19845-PA [Drosophila pseudoobscura], gi|125774173|ref|XP_001358345.1| G...
212.0 [0..9] [251..69]

Back

Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLKAVRYLL LAGIFAPNLV ASEGIESYEN YYNEIHIDDE QAEAKTRNAL TSPLQRWPGN  60
   61 KILYRISTDY SEQEVANVRT AMSSFGEQTC VQFEEIEGAP PAGKRYVSFK KSPNMCGTRV 120
  121 GYQPLSFGPH EVVLNEKCLT MPAVIQHETL HLLGLFHEQS RPDRDEYVQI DYDNIPRKYW 180
  181 SQFMAMDQTT TFNVPYDYES VMHYSKNAFA KDPSKPTIRA LIGGKAVERE MGQVRGPSEG 240
  241 DWTKIRLMYK C

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.522879
Match: 1astA
Description: STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 4.1917763812737 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.85190688399485 bayes_pls_golite062009
metallopeptidase activity 3.22757426039234 bayes_pls_golite062009
endopeptidase activity 2.98133341931091 bayes_pls_golite062009
hydrolase activity 2.78513171530601 bayes_pls_golite062009
metalloendopeptidase activity 2.54952091441017 bayes_pls_golite062009
binding 0.910292205820092 bayes_pls_golite062009
catalytic activity 0.891187593353827 bayes_pls_golite062009
protein binding 0.553658909577001 bayes_pls_golite062009
exopeptidase activity 0.492456025063956 bayes_pls_golite062009
receptor activity 0.332822250208465 bayes_pls_golite062009
transmembrane receptor activity 0.136560284009247 bayes_pls_golite062009
aminopeptidase activity 0.00533877867882504 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle