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View Structure Prediction Details

Protein: CG6225-PB, CG6225-PA
Organism: Drosophila melanogaster
Length: 704 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6225-PB, CG6225-PA.

Description E-value Query
Range
Subject
Range
gi|148669738, gi... - gi|74204048|dbj|BAE29019.1| unnamed protein product [Mus musculus], gi|148669738|gb|EDL01685.1| X-pr...
602.0 [0..19] [662..8]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAKWIWRL ALSILLVVGF VAAEKPTGYH REICQYRKGK HIQPMSVYHN RLMAMREQMQ  60
   61 IRATLQGPEI YGYILPSTDE HLNQEVAARD QRLRYLSGFS GVRAFAAVTS HGAAIWVENR 120
  121 YAQQADGELE CDWEIYLTSG NVSVADWLGS HVHIDKRVGA DPHLVPHSLW VQWERELEDK 180
  181 FLKLVRINTN LVDHIWGDER PEMPKNQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.76
Match: 1kp0A
Description: Creatinase; Creatinase, catalytic (C-terminal) domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [208-603]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIKVHEKHFA GESWQDKVKE LRRRLAHLGC DAMVVTSLTE IAYLLNIRGT DIPYTPVIKS  60
   61 YAVISRDDIF FYVDHSKISL GIDLHLRTDC FNEDCVKIKE YNQIWSDIRT YAQIWKRVLV 120
  121 PAPCVQDLGA SEAIYTSMPG KIVVWEISPI IFMRAQKNSD EQAGMRRAHI RDGAAICEAM 180
  181 SNMETRFHTE QWTEEKIKYE VELWRLSQKH AKGLSLRTVV AYGEHSALPY YISSNVTNIE 240
  241 VSDQSLLVIE SGGQYLEGTT DVSRTFIFGE PTHEMKKAYT NVLAGILHLA QLKFPSDLKP 300
  301 SEVDALVRSM VWKDMTDFPQ ATGHGIGSFG SVEEPPISVS YGKNSSFHFK QGYFFSSESG 360
  361 YYKRDDFGVR LKNVLEVVDT GHTHPSGARF LAFRDV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.30103
Match: 1pv9A
Description: Prolidase from Pyrococcus furiosus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 2.60615909541559 bayes_pls_golite062009
transcription regulator activity 2.3228898238998 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.18503136472662 bayes_pls_golite062009
nucleic acid binding 2.09388149606759 bayes_pls_golite062009
DNA binding 1.92799814679615 bayes_pls_golite062009
binding 1.4562583231987 bayes_pls_golite062009
hydrolase activity 1.43646476372001 bayes_pls_golite062009
transcription factor activity 1.22693836163332 bayes_pls_golite062009
aminopeptidase activity 0.89399203910285 bayes_pls_golite062009
exopeptidase activity 0.762255574851485 bayes_pls_golite062009
metallopeptidase activity 0.629480947971878 bayes_pls_golite062009
protein binding 0.170797254754318 bayes_pls_golite062009
catalytic activity 0.148551873544128 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [604-704]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TMVPYEPKLI DSTLLSAAEK RLLNEYNAKI RNDIGDELKR LGNMRAFYWM MNQTRHIREY  60
   61 LPEDEYRSAT GAGSCGHSAS PLILLGLGLM VILSAIIPSR S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle