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View Structure Prediction Details

Protein: CG15100-PA
Organism: Drosophila melanogaster
Length: 1022 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15100-PA.

Description E-value Query
Range
Subject
Range
gi|21428760 - gi|21428760|gb|AAM50099.1| AT05114p [Drosophila melanogaster]
608.0 [0..1] [1011..1]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIYTNDGNP LGLQLLMLAK FAKQPVQVQL VNLNDAKYKD LLVLPTLELD NGLRLFSPAA  60
   61 IAKYLFVGKG QQRDEWLEWS ATLLAPALAH HMAVGHKADA NALPVLNALV KKLDDKLKAT 120
  121 PYLAGDKPSA ADIAIWSLLA PDGTLKGAQN VDNLRDWYGR VKALPEVQEV LAEQPLKDLS 180
  181 FNALQQSNRY GGLHHVPLKR LSLADASKLL VDTTPTVADT VTNEEISAAK AAFTYTAPKE 240
  241 IKEERTVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 1eemA
Description: Class omega GST
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
copper ion binding 2.40748863139548 bayes_pls_golite062009
transcription regulator activity 2.30799114442278 bayes_pls_golite062009
binding 1.78119413208485 bayes_pls_golite062009
oxidoreductase activity 1.71351657881838 bayes_pls_golite062009
DNA binding 1.67625823552709 bayes_pls_golite062009
nucleic acid binding 1.64654156180867 bayes_pls_golite062009
catalytic activity 0.672192331361968 bayes_pls_golite062009
transition metal ion binding 0.301062636244523 bayes_pls_golite062009
protein binding 0.157273259994554 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [249-949]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKPGERNVLI TSALPYVNNV PHLGNIIGCV LSADIYARYS RSAGYNTLLI CGTDEYGTAT  60
   61 ENKALAENLT PREICDKYFE LHNAIYRWFG IGFDYFGRTT TQEQTDIVQE AFKDVLKAGY 120
  121 IITESVEQLL CQKCDRFLAD RFVEGTCPHP GCGYEDARGD QCDKCGKLVN ATELIRPRCK 180
  181 VCNSAPVLRS SDQLFIDLPK AEPQLKEWVD KSEGGWTHNA KVITRAWLKE GLKPRCITRD 240
  241 LKWGIPVPHE GFEKKVFYVW FDAPFGYVSM TKRYTKEYQQ WWQPAKGTDV ELFQFMAKDN 300
  301 VPFHSVVWPS VLLAINKGHT LVSHIMATEY LNYEDGKFSK SRGIGVFGND AQETGIPADV 360
  361 WRFYLASARP EGQDSSFSWN DLAARNNSEL LNNLGNFVNR ALVFCEKNFS STVPGVITTQ 420
  421 DELVLLALIN RELRGYINSM EKAKLRDGVR HLLAISRHGN GYMQSQQPWV LLKGTDDQKT 480
  481 RASTIIGLCV NIACLLANLL FPYMPTTART LFGQLNAKQT PLNAEKPLVT LLLPAGHQIG 540
  541 KPAPLFAKLE QSFIDELKGK YGGAQATNDA AHSQISAADL EKAVQAQADK VRELKASTKD 600
  601 KAIWQPEVTK LLDLKKQLEE AKKKTATAAA PAATPAPSNG SQSVQDLEKA IQEQGDKVRK 660
  661 LKGSTKDKTV WQPEVNILLD LKKQLEAVQK AAKAAPAANA A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 128.0
Match: 1rqgA
Description: Methionyl-tRNA synthetase from Pyrococcus abyssi
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity, forming aminoacyl-tRNA and related compounds 7.16276509815667 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 7.16276509815667 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 7.13957775963187 bayes_pls_golite062009
ligase activity 6.11211476973434 bayes_pls_golite062009
methionine-tRNA ligase activity 5.54691369460949 bayes_pls_golite062009
isoleucine-tRNA ligase activity 3.76808520367507 bayes_pls_golite062009
glutamate-tRNA ligase activity 2.63681738794687 bayes_pls_golite062009
catalytic activity 2.37674226834122 bayes_pls_golite062009
tyrosine-tRNA ligase activity 1.88984817882585 bayes_pls_golite062009
binding 1.63608200808719 bayes_pls_golite062009
nucleic acid binding 1.63574252106186 bayes_pls_golite062009
arginine-tRNA ligase activity 1.50161401062914 bayes_pls_golite062009
nucleotidyltransferase activity 1.23060777952134 bayes_pls_golite062009
tryptophan-tRNA ligase activity 1.14187887833901 bayes_pls_golite062009
cysteine-tRNA ligase activity 0.844943947059557 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.30220012698115 bayes_pls_golite062009
transition metal ion binding 0.256582403702199 bayes_pls_golite062009
glutamine-tRNA ligase activity 0.118292082006187 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [950-1022]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAASPAATAD AAKVKALEDK IAQQAEKVRT LKATGDAAVW KPEVDILLSL KNELAALTGT  60
   61 PVAGGQGKGK KKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 2djvA
Description: No description for 2djvA was found.

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