| Protein: | FBpp0303033, Pcl-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1043 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0303033, Pcl-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
659.0 | [0..2] | [1040..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MMNNHFHLQH DHPPQNVAHP FMQQPSTAVP SAPPATYGYL AQPAGQQPQW MTTTYQILPP 60
61 SVGPATVAKR YYATTGPQTT HPTHPSTIQI TNSFAQQSTP PKQQAAT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-178] |
1 11 21 31 41 51
| | | | | |
1 SCSPFKANNI RIISTAPSVY SLNKPPQEAH STYAPVQSYY LPSGGGQTAG QINLLAASGT 60
61 GKQLQPPPLV P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [179-329] |
1 11 21 31 41 51
| | | | | |
1 VTNSTSPPST VVLDRINICI NNHYTETPTS LSSSLTTAQQ PSPIIPAIQH KAILPLIDSS 60
61 TADSSSCSSS SVSSSSYSGT ATTSAAVVIV DEPDSTTTTP QTPPTTPEAM SSPGKSSPSP 120
121 PLLATQSLLK GVNSMKPSFK TVEAAPPTPP T
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [330-483] |
1 11 21 31 41 51
| | | | | |
1 PPSPPPPPPA PPVAAPSPAV TYALQEDVFI KCNDGRFYLG TIIDQTSDQY LIRFDDQSEQ 60
61 WCEPDKLRKL GGGSSITAGG GGASTTESTN TSPSGPMCVA CKRSDIEDVV EICERCGRGY 120
121 HRGCTVEIVT GSGIWSCKRC AKPMKMQQPV SHKI
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 2ysmA |
| Description: | No description for 2ysmA was found. |
|
Region A: Residues: [484-581] |
1 11 21 31 41 51
| | | | | |
1 TKPAGICRQL PYHADKLSWD EKHRVNEEQI YCYCGKPGKF DHNMLQCCKC RNWFHTQCMQ 60
61 NFKKKLLRGD MFFVFCCTVC NNGIEFVRRM QIEWVDVL
|
| Detection Method: | |
| Confidence: | 2.48 |
| Match: | 1wepA |
| Description: | Solution structure of PHD domain in PHF8 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.84543733401722 | bayes_pls_golite062009 |
| binding | 2.84147289283175 | bayes_pls_golite062009 |
| histone binding | 2.70040054044692 | bayes_pls_golite062009 |
| DNA binding | 2.61461572393763 | bayes_pls_golite062009 |
| nucleic acid binding | 2.59290953932215 | bayes_pls_golite062009 |
| transcription repressor activity | 2.05685078783854 | bayes_pls_golite062009 |
| transcription factor activity | 1.59046392323038 | bayes_pls_golite062009 |
| methylated histone residue binding | 1.34633512809029 | bayes_pls_golite062009 |
| protein binding | 1.32925779020231 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.840604267149776 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.840604267149776 | bayes_pls_golite062009 |
| transcription activator activity | 0.663225694514289 | bayes_pls_golite062009 |
| chromatin binding | 0.238939737856273 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0471610688739243 | bayes_pls_golite062009 |
| transcription factor binding | 0.0293954104210474 | bayes_pls_golite062009 |
|
Region A: Residues: [582-670] |
1 11 21 31 41 51
| | | | | |
1 HIALYNLRKH QHQKYHHLLN DIWPFILEQR HQLPICEKWR TLPETALMER LKQTLKDYSD 60
61 RFVCGREFKR APAFYALRHS GPPHIPKVF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [671-853] |
1 11 21 31 41 51
| | | | | |
1 LEPHEELSDE LLEKRFKLML MPEEPDEGAN ELPKRVPKDV YEFNTDEDDP VETSEDEIPI 60
61 KQIIEKAKKQ AAQKADKHDE LPLKPDLADD NANDGDPGKL PAPIPPLLDA NSSRKRKAFR 120
121 LSKRYDNSRN HCDLSSDENS SSSRGTSSLD LIIPPPVNFL GRNNPFLMAT PKKASQGRSI 180
181 SVG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [854-1043] |
1 11 21 31 41 51
| | | | | |
1 TGVGVNGIIN SIFKLKGTSK EQPRMVRTIK RRLSAKDITI GPNQEVRRRR TRRLTTAIEV 60
61 ISTTTINPIP SHYLPIYAKD LQPPAPPMGK PTHGRLLRQR PQKQSPSQSR RNSTSSTATS 120
121 SSSNGIGAPG HSMLDLKQSV NKYFGGAMNR IDAGEPFAIR AKRRMGNGQV QYLVEWGGDT 180
181 ATTAIGLLGN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
