| Protein: | FBpp0294063, Tfb... |
| Organism: | Drosophila melanogaster |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0294063, Tfb....
| Description | E-value | Query Range |
Subject Range |
|
|
716.0 | [0..1] | [585..1] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MTTSSEDVLL QMGEVRYKKG DGTLYVMNER VAWMAEHRDT VTVSHRYADI KTQKISPEGK 60
61 PKVQLQVVLH DGNTSTFHFV NRQGQAAMLA DRDKVKELLQ QLLPNFKRKV D
|
| Detection Method: |  |
| Confidence: | 37.30103 |
| Match: | 1pfjA |
| Description: | Solution structure of the N-terminal PH/PTB domain of the TFIIH P62 subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 6.19860786133833 | bayes_pls_golite062009 |
| binding | 3.29080729281876 | bayes_pls_golite062009 |
| protein binding | 3.17213698546013 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10584700564436 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.05456820914801 | bayes_pls_golite062009 |
| nucleic acid binding | 1.85794418941003 | bayes_pls_golite062009 |
| DNA binding | 1.77960272183811 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 1.38051627844132 | bayes_pls_golite062009 |
| enzyme binding | 0.977337620102034 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.704949129344961 | bayes_pls_golite062009 |
| protein kinase activity | 0.565124275151513 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.361321073558889 | bayes_pls_golite062009 |
| hydrolase activity | 0.354215977182915 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.268141992393579 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.242734483980252 | bayes_pls_golite062009 |
| protein domain specific binding | 0.236765394237244 | bayes_pls_golite062009 |
| kinase activity | 0.206532566781865 | bayes_pls_golite062009 |
| kinase binding | 0.144753921529348 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.0735802149531289 | bayes_pls_golite062009 |
| actin binding | 0.0485598963526399 | bayes_pls_golite062009 |
|
Region A: Residues: [112-227] |
1 11 21 31 41 51
| | | | | |
1 KDLEDKNRIL VENPNLLQLY KDLVITKVLT SDEFWATHAK DHALKKMGRS QEIGVSGAFL 60
61 ADIKPQTDGC NGLKYNLTSD VIHCIFKTYP AVKRKHFENV PAKMSEAEFW TKFFQS
|
| Detection Method: | |
| Confidence: | 1.68 |
| Match: | 1x3aA |
| Description: | Solution structure of the BSD domain of human Synapse associated protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [228-330] |
1 11 21 31 41 51
| | | | | |
1 HYFHRDRLTA GTKDIFTECG KIDDQALKAA VQQGAGDPLL DLKKFEDVPL EEGFGSVAGD 60
61 RNVVNSGNIV HQNMIKRFNQ HSIMVLKTCA NVTSAPSTMT NGT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [331-486] |
1 11 21 31 41 51
| | | | | |
1 NNANGPVSQS AYTNGMNGKG QATATATKSS SDQVDKDEPQ SKKQRLMEKI HYVDLGDPIL 60
61 EGDDSANGEK AKSKHFELSK VERYLNGPVQ NSMYDNHNDP MSLEEVQYKL VRNSESWLNR 120
121 NVQRTFICSK AAVNALGELS PGGSMMRGFQ EQSAGQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [487-585] |
1 11 21 31 41 51
| | | | | |
1 LVPNDFQREL RHLYLSLSEL LKHFWSCFPP TSEELETKLQ RMHETLQRFK MAKLVPFENR 60
61 AMHELSPLRS SLTQHLNQLL RTANSKFATW KERKLRNTR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
