| Protein: | cg-PC |
| Organism: | Drosophila melanogaster |
| Length: | 629 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cg-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
812.0 | [0..1] | [628..337] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MPYLLSTDGS LAVQKDVKGL TAGGKNNVVR RMFVVNDPSF PPGTQRVITA GGASTVVKKQ 60
61 DNNQQVLSLD KNCDILPGIS VQVQKVIQGL EDNEDSQGEA PNLKLEPGTL ELSPKTELQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [120-302] |
1 11 21 31 41 51
| | | | | |
1 ESMHFSETDA TIKKERPYSC DECGKSFLLK HHLTTHARVH TGERPHICTH CGKSFAHKHC 60
61 LNTHLLLHST ERPYQCQECK KSFTLKHHLL THSRVHSRER PFVCQECGRA FPLKRHLVTH 120
121 SKFHAGERPY VCEECGESFA QENHLIMHSR FHGSLNPFVC AECGASFPRK FQLVNHGRIH 180
181 GKI
|
| Detection Method: | |
| Confidence: | 61.30103 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [303-350] |
1 11 21 31 41 51
| | | | | |
1 PHSCTVCGKE FLQKRTLVSH MRRVHTGEQA HPCVSCGEGF LTKAELHQ
|
| Detection Method: | |
| Confidence: | 3.56 |
| Match: | 2dlqA |
| Description: | No description for 2dlqA was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 4.47951889934838 | bayes_pls_golite062009 |
| nucleic acid binding | 4.35187767955595 | bayes_pls_golite062009 |
| DNA binding | 4.31051339571017 | bayes_pls_golite062009 |
| transcription factor activity | 3.28758716579796 | bayes_pls_golite062009 |
| transcription repressor activity | 3.07956158665183 | bayes_pls_golite062009 |
| binding | 2.99742524370422 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.96255357208943 | bayes_pls_golite062009 |
| transcription activator activity | 1.97757778483124 | bayes_pls_golite062009 |
| chromatin binding | 1.91511881662436 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.35857850481346 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.33097016250582 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.26862497534835 | bayes_pls_golite062009 |
| transcription factor binding | 1.23738346570539 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.16887811832337 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.00239065862819 | bayes_pls_golite062009 |
| protein binding | 0.952480850696098 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.627794176881836 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
|
Region A: Residues: [351-459] |
1 11 21 31 41 51
| | | | | |
1 HVRTAHNGVN PNTSSATIIA NQQLQQAHHH QAGQQTHPQT ITVVSNPGNS TLLTVSTTDA 60
61 NGVARPQFVC RECGSAFNSR EALALHLRLH TGDKSLMTDL CALTAALPG
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1g2dC |
| Description: | TATA box-binding zinc finger, TATAZF |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [460-523] |
1 11 21 31 41 51
| | | | | |
1 HFLSTASLNP GTVVTANPNL VGQSPVPVQI ISSTGQVMSQ TTLVQAANST HPQAVVTAVP 60
61 TMPV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [524-629] |
1 11 21 31 41 51
| | | | | |
1 HGQQQHLQHV AQQQQQQQQQ QQQQQQHVVS VAPANKPKSH FCASCGKGFA AKHGLMQHNR 60
61 RHPNGGCTVR THVCECGKAF FQKNHLMLHQ RQHLETKPAI SQQQVC
|
| Detection Method: | |
| Confidence: | 8.09691 |
| Match: | 1x6hA |
| Description: | Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| transcription repressor activity | 3.27542149084008 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| transcription activator activity | 2.19952417915035 | bayes_pls_golite062009 |
| chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.48624530884061 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.42975942698743 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.34049786451995 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.18599503594288 | bayes_pls_golite062009 |
| protein binding | 1.00484935878505 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
