| Protein: | lin19-PB, lin19-... |
| Organism: | Drosophila melanogaster |
| Length: | 774 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lin19-PB, lin19-....
| Description | E-value | Query Range |
Subject Range |
|
|
759.0 | [0..3] | [774..210] |
|
Region A: Residues: [1-774] |
1 11 21 31 41 51
| | | | | |
1 MNRSGNSQTT QKLVNLDDIW SELVEGIMQV FEHEKSLTRS QYMRFYTHVY DYCTSVSAAP 60
61 SGRSSGKTGG AQLVGKKLYD RLEQFLKSYL SELLTKFKAI SGEEVLLSRY TKQWKSYQFS 120
121 STVLDGICNY LNRNWVKREC EEGQKGIYKI YRLALVAWKG HLFQVLNEPV TKAVLKSIEE 180
181 ERQGKLINRS LVRDVIECYV ELSFNEEDTD AEQQKLSVYK QNFENKFIAD TSAFYEKESD 240
241 AFLSTNTVTE YLKHVENRLE EETQRVRGFN SKNGLSYLHE TTADVLKSTC EEVLIEKHLK 300
301 IFHTEFQNLL NADRNDDLKR MYSLVALSSK NLTDLKSILE NHILHQGTEA IAKCCTTDAA 360
361 NDPKTYVQTI LDVHKKYNAL VLTAFNNDNG FVAALDKACG KFINSNVVTI ANSASKSPEL 420
421 LAKYCDLLLK KSSKNPEDKE LEDNLNQVMV VFKYIEDKDV FQKYYSKMLA KRLVNHTSAS 480
481 DDAEAMMISK LKQTCGYEYT VKLQRMFQDI GVSKDLNSYF KQYLAEKNLT MEIDFGIEVL 540
541 SSGSWPFQLS NNFLLPSELE RSVRQFNEFY AARHSGRKLN WLYQMCKGEL IMNVNRNNSS 600
601 TYTLQASTFQ MSVLLQFNDQ LSFTVQQLQD NTQTQQENLI QVLQILLKAK VLTSSDNENS 660
661 LTPESTVELF LDYKNKKRRI NINQPLKTEL KVEQETVHKH IEEDRKLLIQ AAIVRIMKMR 720
721 KRLNHTNLIS EVLNQLSTRF KPKVPVIKKC IDILIEKEYL ERMEGHKDTY SYLA
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1u6gA |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 9.95820721075934 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 9.63704265478699 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.59660059921406 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 7.32718329074249 | bayes_pls_golite062009 |
| vasopressin activated calcium mobilizing receptor activity | 6.69190468636718 | bayes_pls_golite062009 |
| transcription regulator activity | 4.76121492612224 | bayes_pls_golite062009 |
| ligase activity | 4.08678005991666 | bayes_pls_golite062009 |
| transcription factor activity | 3.7855017556511 | bayes_pls_golite062009 |
| binding | 2.45185337633142 | bayes_pls_golite062009 |
| transcription repressor activity | 2.39237599101586 | bayes_pls_golite062009 |
| protein binding | 2.34145982999922 | bayes_pls_golite062009 |
| transcription activator activity | 2.05043065144612 | bayes_pls_golite062009 |
| nucleic acid binding | 1.54797684894025 | bayes_pls_golite062009 |
| DNA binding | 1.42215436462553 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.23862224095769 | bayes_pls_golite062009 |
| transporter activity | 0.891050405674973 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.648150681919233 | bayes_pls_golite062009 |
| transcription factor binding | 0.612315945412079 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.368917395770011 | bayes_pls_golite062009 |
| catalytic activity | 0.351553138703956 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.146182977030285 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.117670813298683 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.107671044044222 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0102780098866235 | bayes_pls_golite062009 |
