| Protein: | Bap170-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1688 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Bap170-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
810.0 | [0..63] | [1687..2] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MSATTIDNVR VLLQSLPAAA VNSATQPGDL QTPGKIAAPA TPLRAKNPAQ LQIMPEKVEE 60
61 MPPSPPEEFW RDLQQFHERR GTPLTQPARI SGKHVDLYKL YNEVTERGGF NKVTMRDEWD 120
121 EVYSAMETLR ERCVNGTASI KHIYRRYLDK YERLNFFGED PDKMEALEAA IEIVEMGGGR 180
181 SRSRFLAGAG GGLGSIFGSA HSTLPAVPMA YNQRQHSV
|
| Detection Method: |  |
| Confidence: | 40.30103 |
| Match: | 2cxyA |
| Description: | No description for 2cxyA was found. |
|
Region A: Residues: [219-584] |
1 11 21 31 41 51
| | | | | |
1 NVERRRQYKM STQLHRHSSY EKLLLSLLSP LPNEQDFAIN VCTLMANEAR HTLQLSECPK 60
61 LLDVLLAHLG VYADFTMRQL FQHSYTEVRH HSQLSFWRDL LHDKPQVLEL YTDEQAWLDN 120
121 GLISKEDGEN SAARSELLAA CDELHFLNLR RSNGTDERMG QRVLQIVQLV RTLSFHQENH 180
181 ALLASNRTLW RYLVMGANVR WSNIHIQALE TAGNLAQQFE LLDPTTDELS RNLLATLCEG 240
241 IDSNDRAVIM SCLEILYKLC GREGNSQHIN RCLGLDFYQR AMLLLSLTDV MMIIFTLEAV 300
301 YALSALGARP CSMLMQVRGL IDQLVTLITV EAQSYGTGGC ILMRVVEVFP GNMAASLAQN 360
361 MPAILA
|
| Detection Method: | |
| Confidence: | 2.4 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.96084803796407 | bayes_pls_golite062009 |
| nucleic acid binding | 2.69616509670156 | bayes_pls_golite062009 |
| protein binding | 2.66176697577398 | bayes_pls_golite062009 |
| transcription regulator activity | 2.19067997822967 | bayes_pls_golite062009 |
| DNA binding | 1.96172460362671 | bayes_pls_golite062009 |
| transporter activity | 1.85346023606579 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.51565516399356 | bayes_pls_golite062009 |
| transcription activator activity | 1.47146260606784 | bayes_pls_golite062009 |
| protein transporter activity | 1.38613229168078 | bayes_pls_golite062009 |
| transcription factor activity | 1.21493607378314 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.710528717985301 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.39311980867126 | bayes_pls_golite062009 |
| RNA binding | 0.243875756041061 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.109435859778099 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0728493557966827 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0641324729536009 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.0615190129942244 | bayes_pls_golite062009 |
| transcription factor binding | 8.79739237675814E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [585-1601] |
1 11 21 31 41 51
| | | | | |
1 PGPTSLTTLP TSLQVAVKPP AVLPTPTPAQ TQVLPHGEQT PLVTALPGLP MPSLPQVQLP 60
61 VPSLPQVQLP PIAATVTLPS LPSASQSFTH EDEQYALAWL GATYERAGNG NDLRVEQAEL 120
121 YRIYLSHCQK AGKLSVVNHM QFPRLVRLIF NQSVGPVIVR HLDGIELPGT YYVGIRMRAQ 180
181 PLAMQQRPTP SIVPVKKDTP ILPKQPFSDP VQTEVASEES VSSAVTPPPS SSLIKSLLAN 240
241 KVTERQQKQK AQAQTPQPPA LVATTASGTN ATQPIKVTST AISAFVNNPL MQHTPVKVGQ 300
301 TTIKPLHPQM AIEKKPITDS APPPLAPLSG ANVVTKDASG RTLIIASAAA KRKLTIDEEQ 360
361 NKRLALDAAA SSSSSSSSGG KEEAQVTPSK NAANLYADLA ASILEDEDMD DVPPLAKPSQ 420
421 EQSQQHPQQA QQLQLIPAKV QPTQRQLVFP GSNVVSPAPH SQLKLATTAT IKTDQGLQTV 480
481 PVILQPKTAM DSTPAPQTQY VLATNQQGQT YLVAQQPTIP TSTQSAPPTL LVTQTPQQQT 540
541 KTIIILQQPG GVSAANVAGT QKMIMTTAQG QQVLVTTTTA PQLAQPRTST PQQQIFIAPQ 600
601 RPVPALGAGQ MSPSLLSQLN QIPATIKLHQ PQPQPQLVSP QLAPQQRLVA AKPGASLPIP 660
661 QLQQHQSIIQ QHIISGPSTP TSTVGGTVGG EKRQVILGGI KETTLITQTS ATPAPLQQSQ 720
721 LNSQTIITQS PTSTAIVGGV ALQQQHHIRS VLDQQQQHHP SIIQQKITMP AISEATKPKI 780
781 APVPVSPTVT LLAKKPAPPQ PAQVSSPKPS VTQAVVVTTS GTSDSTEGGK TVVLATSEAK 840
841 PAESEVVAQT VVPPAVVTTG PSSSSLVVSQ SVYAASGPNA NPTPSPMPVD ANWLYICDWR 900
901 NCPRKKFKSL NELQYHVCSV HCPDHLDSDA DIYCQWGSGP NFCDNRARKR YSLMTHLIDR 960
961 HLTTENLRAS VQRRLATGIH NVAPTQAPVT IVRNEGHAQR LAGGATGSPS GPASAVP
|
| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [1602-1688] |
1 11 21 31 41 51
| | | | | |
1 VVGSAAMQAM NRHTTDYTNA KELMDENEGP VTKSIRLTAA LIIRNLVTYS ATAKRSLKRY 60
61 ESRLANVAFS NVEASGVLSH IMYELSQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
