| Protein: | TWST2_RAT |
| Organism: | Rattus norvegicus |
| Length: | 160 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TWST2_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
132.0 | [0..1] | [160..25] |
|
|
128.0 | [0..1] | [160..25] |
|
|
128.0 | [0..1] | [160..25] |
|
|
127.0 | [0..1] | [160..25] |
|
|
122.0 | [0..1] | [160..25] |
|
|
119.0 | [0..1] | [160..26] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MEEGSSSPVS PVDSLGTSEE ELERQPKRFG RKRRYSKKSS EDGSPTPGKR GKKGSPSAQS 60
61 FEELQSQRIL ANVRERQRTQ SLNEAFAALR KIIPTLPSDK LSKIQTLKLA ARYIDFLYQV 120
121 LQSDEMDNKM TSCSYVAHER LSYAFSVWRM EGAWSMSASH
|
| Detection Method: |  |
| Confidence: | 13.39794 |
| Match: | 1r05A |
| Description: | Solution Structure of Max B-HLH-LZ |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.39500382187264 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| transcription repressor activity | 2.58751248599889 | bayes_pls_golite062009 |
| transcription activator activity | 2.5495467409976 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.42306484786159 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.31910036997977 | bayes_pls_golite062009 |
| transcription corepressor activity | 2.03674713048499 | bayes_pls_golite062009 |
| protein binding | 1.59929864805879 | bayes_pls_golite062009 |
| promoter binding | 1.56457725225443 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.39260472877067 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.3655541712365 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.29436315000437 | bayes_pls_golite062009 |
