Protein Overview: gi|114646062

General Information:
Name(s) found:	gi\|114646062 [NCBI NR]
Description(s) found: Found 3 descriptions. SHOW ALL	gi\|114646062\|ref\|XP_001164135.1\| PREDICTED: myogenic factor 6 (herculin) [Pan troglodytes] [NCBI NR]
Organism:	Pan troglodytes
Length:	242 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMDLFETGS YFFYLDGENV TLQPLEVAEG SPLYPGSDGT LSPCQDQMPP EAGSDSSGEE  60
   61 HVLAPPGLQP PHCPGQCLIW ACKTCKRKSA PTDRRKAATL RERRRLKKIN EAFEALKRRT 120
  121 VANPNQRLPK VEILRSAISY IERLQDLLHR LDQQEKMQEL GVDPFSYRPK QENLEGADFL 180
  181 RTCSSQWPSV SDHSRGLVIT AKEGGASIDS SASSSLRCLS SIVDSISSEE RKLPCVEEVV 240
  241 EK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..87]	Pfam	37.040959	No description for PF01586.7 was found. No confident structure predictions are available.
2	View Details	[88..157]	PSI-BLAST	17.69897	Myod B/HLH domain
3	View Details	[158..242]	MSA	2.636997	View MSA. No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
transcription regulator activity	5.38658950816179	bayes_pls_golite062009
DNA binding	5.18654839258297	bayes_pls_golite062009
nucleic acid binding	5.05768805749761	bayes_pls_golite062009
transcription factor activity	4.78039531631248	bayes_pls_golite062009
transcription activator activity	3.87875547821718	bayes_pls_golite062009
binding	3.81829206350975	bayes_pls_golite062009
sequence-specific DNA binding	3.42035985454056	bayes_pls_golite062009
RNA polymerase II transcription factor activity	3.39500382187264	bayes_pls_golite062009
protein binding	2.64975291677725	bayes_pls_golite062009
transcription factor binding	2.61163564741984	bayes_pls_golite062009
transcription repressor activity	2.58751248599889	bayes_pls_golite062009
RNA polymerase II transcription factor activity, enhancer binding	2.42306484786159	bayes_pls_golite062009
transcription corepressor activity	2.03674713048499	bayes_pls_golite062009
transcription cofactor activity	1.52770895937238	bayes_pls_golite062009
promoter binding	0.8576109846276	bayes_pls_golite062009
protein heterodimerization activity	0.53175615551166	bayes_pls_golite062009
transcription coactivator activity	0.3513586903977	bayes_pls_golite062009
protein dimerization activity	0.20674648626116	bayes_pls_golite062009

3

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle