| Protein: | gi|125550497 |
| Organism: | Oryza sativa Indica Group |
| Length: | 250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125550497.
| Description | E-value | Query Range |
Subject Range |
|
|
286.0 | [0..21] | [250..27] |
|
Region A: Residues: [1-250] |
1 11 21 31 41 51
| | | | | |
1 MAVATSFATL AIARPAAERA LLASKTPSPL LSIRTGTGTA RLPSSAVFGG FTPALSAAHS 60
61 RARFVSSATA DPKEVDLQSK ITNKVYFDIS IGNPVGKNVG RVVIGLYGDD VPQTAENFRA 120
121 LCTGEKGFGY KGSSFHRVIK DFMIQGGDFD KGNGTGGKSI YGRTFKDENF KLVHTGPGVV 180
181 SMANAGPNTN GSQFFICTVK TPWLDGRHVV FGQVIEGMDI VKMIESQETD RGDRPKKKVV 240
241 ISECGELPVV
|
| Detection Method: |  |
| Confidence: | 72.522879 |
| Match: | 1ak4A |
| Description: | Cyclophilin (eukaryotic) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 4.3775483906311 | bayes_pls_golite062009 |
| histone deacetylase activity | 4.29026678196473 | bayes_pls_golite062009 |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| deacetylase activity | 3.49940864924766 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.01511519120932 | bayes_pls_golite062009 |
| RNA binding | 2.94609837984526 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.46018233647024 | bayes_pls_golite062009 |
| mRNA binding | 1.45537055700871 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| nucleic acid binding | 0.939772862764466 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| hydrolase activity | 0.493806105600863 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.408539130322443 | bayes_pls_golite062009 |
| drug binding | 0.36339132904137 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.322244688184474 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.286133802341887 | bayes_pls_golite062009 |
| histone binding | 0.268719695649015 | bayes_pls_golite062009 |
| protein binding | 0.130251391659493 | bayes_pls_golite062009 |
