| Protein: | TAF5_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 643 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF5_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
495.0 | [0..42] | [642..1101] |
|
|
486.0 | [0..63] | [642..525] |
|
|
484.0 | [0..127] | [642..928] |
|
|
472.0 | [0..151] | [642..955] |
|
|
468.0 | [0..128] | [642..802] |
|
|
468.0 | [0..62] | [632..711] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MSATNGPQPQ DLNRIVLDYL AKKGYSRTEA MLRLEASGSG VSVEEKLKSI EETPDAYTHT 60
61 YTILRDWVDS SLELYKAELH RILFPIFVHS YLNLLSQDHY EAAKQFYELF KDDHTDLHDF 120
121 DVKNLKSLSL PSHVAEDRTA QQYRQNKYQL HFSRITFDLL LHFLFENVSN GGSIIIKLIN 180
181 QHIDIHI
|
| Detection Method: |  |
| Confidence: | 23.69897 |
| Match: | 2j49A |
| Description: | No description for 2j49A was found. |
|
Region A: Residues: [188-577] |
1 11 21 31 41 51
| | | | | |
1 VPGRPTVLEN AKVINEQEGI TGQSFERGDA QLQPVKLQQM PMDKEMEKIV EMDLEEEDMM 60
61 HQNDPNNQSP KLLKEFRKLH EPNAEDAPSR DYIPLPPHKG VDILSEVEAV KDWSKRLHLG 120
121 PRASLPSVCM YTFHHTNNNM NCAEFSPDST MIACGFQESY IRLWSIKADK KSLPKSTSVE 180
181 DSDGSVRLLS HSGPVYGTTF SPDNKYLLSC SEDASARLWS VDTKTALVAY KGHTGPVWDV 240
241 AFGPFGHYFA TASHDQTAQL WSCDHIYPLR VFAGHLSDVD CVTFHPNSAY VLTGSSDKTC 300
301 RLWDVHRGHS VRVFNGHTQP VTAVAIAPDG HTMASADSEG LIHLWDIGTG RRIKTMRGHR 360
361 GNIYSLSFSR ESTVLVSGGS DCTVRAWDVF
|
| Detection Method: | |
| Confidence: | 81.0 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 6.67009948605948 | bayes_pls_golite062009 | |
| general RNA polymerase II transcription factor activity | 5.61142954750278 | bayes_pls_golite062009 |
| actin binding | 3.86142918698875 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.85374902981345 | bayes_pls_golite062009 |
| RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
| acyltransferase activity | 3.35098520158193 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.31615347567536 | bayes_pls_golite062009 |
| GTPase activity | 3.23750443966606 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.14917998298348 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| transcription initiation factor activity | 2.28847626309518 | bayes_pls_golite062009 |
| snoRNA binding | 2.27164613239345 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
| dynactin binding | 1.92897254169098 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| structural molecule activity | 1.47097979074281 | bayes_pls_golite062009 |
| transcription activator activity | 1.23969853550045 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
| myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| type 1 angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 0.700626674902544 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.676924760416604 | bayes_pls_golite062009 |
| transcription repressor activity | 0.658573452658359 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 0.443846546939402 | bayes_pls_golite062009 |
| insulin receptor binding | 0.43316396073854 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.426429095658617 | bayes_pls_golite062009 |
| kinase activity | 0.387572734234845 | bayes_pls_golite062009 |
| myosin II binding | 0.33142771724387 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.311523647180993 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.28606552120995 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 0.231534552000461 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.226335610368636 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.182612389752591 | bayes_pls_golite062009 |
| chromatin binding | 0.151977098745772 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
|
Region A: Residues: [578-643] |
1 11 21 31 41 51
| | | | | |
1 KTNYNNPVSS SLTGSVVTPF SAKTSTFNEV NWSTSPDQMV ALYTKQTPIF NVSFTRRNLC 60
61 LAISVS
|
| Detection Method: | |
| Confidence: | 35.522879 |
| Match: | 1r5mA |
| Description: | Crystal Structure Of The C-Terminal WD40 Domain Of Sif2 |
Matching Structure (courtesy of the PDB): |
|
